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Putative Campylobacter subantarcticus LMG 24374 RM systems
Ref: Miller,W.G. et al. Genome Biol Evol (2014) In press
REBASE ref # 18896
Complete sequence: 1,782,536 bp
GenBank #: CP007772
REBASE acronym: Csu24374
Org_num: 14645
All begin CSUB8521_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
374 | DNA helicase (AAA domain) | |||
375 | R | Csp216ORF1850P (98% identity) | GAYNNNNNNNTYTC | Csu24374IIP |
376 | ATPase, AAA family | |||
377 | S | S.Cla21009ORF344P (92% identity) | GAYNNNNNNNTYTC | S.Csu24374II |
378 | Fic domain protein | |||
379 | M | M.Csp216ORF1850P (99% identity) | GAYNNNNNNNTYTC | M.Csu24374II |
380 | molybdopterin molybdenumtransferase | |||
1316 | thiamin biosynthesis protein | |||
1317 | S | S.Cje414ORF240012P (97% identity) | S.Csu24374ORF1320P | |
1318 | 167 aa hypothetical protein | |||
1319 | 238 aa hypothetical protein (DUF3800 domain) | |||
1320 | M | M.CcoJV20ORF453P (98% identity) | M.Csu24374ORF1320P | |
1321 | N-succinyl-diaminopimelate deacylase | |||
1778 | recombination factor protein RarA | |||
1780 | M | M.Cla218ORF5870P (98% identity) | ATCNNNNNNNTCC | M.Csu24374III |
1781 | S | S.Cje3ORF4235P (65% identity) | ATCNNNNNNNTCC | S.Csu24374III |
1782 | ATPase, AAA family | |||
1783 | R | Cla218ORF5870P (97% identity) | ATCNNNNNNNTCC | Csu24374IIIP |
1784 | 206 aa hypothetical protein (DUF305 domain) | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
28 | translation initiation factor IF-3 | |||
29 | M | M.Cla16701ORF33P (97% identity) | RAATTY | M.Csu24374I |
30 | transcriptional regulator (WYL domain) | |||
51 | SAM-dependent methyltransferase | |||
52 | RM | Cla16701ORF49P (91% identity) | Csu24374ORF52P | |
53 | dihydroorotase, homodimeric type | |||
109 | imidazoleglycerol-phosphate dehydratase / | |||
110 | M | M1.Csu24377ORF104P (100% identity) | GATC | M1.Csu24374ORF110P |
111 | M | M.Cla00ORF520P (98% identity) | GATC | M2.Csu24374ORF110P |
112 | imidazole glycerol phosphate synthase HisFH, | |||
943 | 95 aa hypothetical protein | |||
944 | M | M.Csu24377ORF972P (100% identity) | M.Csu24374ORF944P | |
945 | phage virion morphogenesis protein | |||
1528 | type II restriction endonuclease | |||
1529 | RM | Csu24377ORF1625P (97% identity) | Csu24374ORF1529P | |
1530 | Sel1 domain repeat-containing protein | |||
1648 | membrane protein | |||
1649 | RM | Cla218ORF6445P (89% identity) | Csu24374ORF1649P | |
1650 | molybdopterin-containing oxidoreductase II, | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
1457 | ribose-phosphate diphosphokinase | |||
1458 | M | M.Csu24377ORF1554P (100% identity) | M.Csu24374ORF1458P | |
1459 | R | Csu24377ORF1554P (99% identity) | Csu24374ORF1458P | |
1460 | pseudogene | |||
1556 | lipid A disaccharide synthase | |||
1557 | R | Cla22395ORF1350P (95% identity) | Csu24374ORF1559P | |
1558 | 229 aa hypothetical protein (DUF4145 domain) | |||
1559 | M | M.Csu24377ORF1655P (80% identity) | M.Csu24374ORF1559P | |
1560 | arsenite-transporting ATPase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
232 | 95 aa hypothetical protein | |||
233 | R | Cin12928McrBP (54% identity) | Csu24374McrBP | |
234 | R | Cje17fMcrCP (77% identity) | Csu24374McrCP | |
235 | motility accessory factor |