Shigella flexneri 2a str. 301 |
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Putative Shigella flexneri 2a str. 301 RM systems
Ref: Jin,Q. et al. Nucleic Acids Res. 30 (20), 4432-4441 (2002)
REBASE ref # 7651
| Sequence length: | GenBank #: | |
| Chromosome: | 4,607,202 bp | AE005674 (NC_004337) |
| plasmid pCP301: | 221,618 bp | AF386526 (NC_004851) |
REBASE acronym: Sfl2
Org_num: 2310
All begin SF, SF_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4363 | 113 aa conserved hypothetical protein | |||
| 4364 | S | S.SflPE577ORF23095P (100% identity) | S.Sfl2ORF4365P | |
| 4365 | M | M.SflTORF4636P (99% identity) | M.Sfl2ORF4365P | |
| 4366 | R | SflTORF4636P (100% identity) | Sfl2ORF4365P | |
| 4367 | IS1 ORF1 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2003 | transmembrane subunit | |||
| 2004 | V | V.SflTDcmP (100% identity) | V.Sfl2DcmP | |
| 2005 | M | M.SflTDcmP (100% identity) | CCWGG | M.Sfl2DcmP |
| 2006 | pseudogene | |||
| 2871 | IS1 ORF1 | |||
| ??? | M | M.Kpn0157ORFAP (56% identity) | CCWGG | M.Sfl2ORFAP |
| 2872 | IS2 ORF2 | |||
| 3299 | site-specific DNA inversion stimulation factor; | |||
| 3300 | M | M.SflTORF3517P (100% identity) | ATGCAT | M.Sfl2ORF3300P |
| 3301 | 75 aa conserved hypothetical protein | |||
| 3404 | D-ribulose-5-phosphate 3-epimerase | |||
| 3405 | M | M.SflTDamP (100% identity) | GATC | M.Sfl2DamP |
| 3406 | membrane protein | |||
| plasmid pCP301 | ||||
| 197 | orf, hypothetical protein | |||
| 198 | M | M.SflP099ORF24190P (100% identity) | M.Sfl2ORF198P | |
| 199 | orf, conserved hypothetical protein | |||