Escherichia coli UCD_JA17_pb |
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Putative Escherichia coli UCD_JA17_pb RM systems
Ref: Coil,D.A. et al. unpublished
REBASE ref # 18751
Contig set: 5,119,992 bp
GenBank #: JMJA00000000 (NZ_JMJA00000000)
REBASE acronym: EcoJA17P
Org_num: 14499
All begin EH65_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22795 | endoribonuclease SymE | |||
| 22800 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.EcoJA17PI |
| ??? | M | M.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | M.EcoJA17PI |
| 22810 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | EcoJA17PIP |
| 22815 | 452 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5050 | 146 aa hypothetical protein | |||
| ??? | M | M.EcoleORFAP (100% identity) | GATC | M.EcoJA17PORFAP |
| 5060 | protein ninE | |||
| 6335 | 140 aa hypothetical protein | |||
| 6355 | M | M.Ecos15739ORF2910P (100% identity) | M.EcoJA17PORF6355P | |
| 6360 | 329 aa hypothetical protein | |||
| 16685 | Fis family transcriptional regulator | |||
| 16690 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoJA17PORF16690P |
| 16695 | 59 aa hypothetical protein | |||
| 17290 | ribulose-phosphate 3-epimerase | |||
| 17295 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoJA17PDamP |
| 17300 | cell division protein DamX | |||
| 9490 | multidrug DMT transporter | |||
| 9495 | V | V.EcosC25DcmP (100% identity) | CCWGG | V.EcoJA17PDcmP |
| 9500 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoJA17PDcm |
| 9505 | hydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22555 | integrase | |||
| 22565 | R | EcoUTI89IP (100% identity) | CACAG | EcoJA17PIIP |
| 22570 | M | M.EcoJA17ORF9465P (100% identity) | CACAG | M.EcoJA17PII |
| 22580 | 233 aa hypothetical protein | |||