Escherichia coli UCD_JA03 |
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Putative Escherichia coli UCD_JA03 RM systems
Ref: Coil,D. et al. unpublished
REBASE ref # 18751
Contig set: 5,287,643 bp
GenBank #: JFFJ00000000 (NZ_JFFJ00000000)
REBASE acronym: EcoJA03
Org_num: 14487
All begin BU65_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20490 | 73 aa hypothetical protein | |||
| 20495 | M | M.Sen59ORF24615P (100% identity) | GATGNNNNNCTG | M.EcoJA03ORF20495P |
| 20500 | S | S.Sen59ORF24615P (100% identity) | GATGNNNNNCTG | S.EcoJA03ORF20495P |
| 20505 | R | Sen59ORF24615P (100% identity) | GATGNNNNNCTG | EcoJA03ORF20495P |
| 20510 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8380 | hydrolase | |||
| 8385 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.EcoJA03DcmP |
| 8390 | V | V.SsoSE61DcmP (100% identity) | V.EcoJA03DcmP | |
| 8395 | multidrug DMT transporter | |||
| 18065 | Presumed portal vertex protein | |||
| 18070 | M | M.Ecoww7ORF20P (100% identity) | TGGCCA | M.EcoJA03ORF18070P |
| 18075 | R | EcoLR24ORF25750P (100% identity) | EcoJA03ORF18070P | |
| 18080 | replication protein A | |||
| 4710 | 308 aa hypothetical protein | |||
| 4715 | M | M.StyR64ORFAP (100% identity) | M.EcoJA03ORF4715P | |
| 4720 | 73 aa hypothetical protein | |||
| 5485 | DNA recombinase | |||
| 5490 | M | M.EcoJA03PORF1295P (100% identity) | M.EcoJA03ORF5490P | |
| 5510 | 125 aa hypothetical protein | |||
| 21980 | cell division protein DamX | |||
| 21985 | M | M.EcoJA03PDamP (100% identity) | GATC | M.EcoJA03DamP |
| 21990 | ribulose-phosphate 3-epimerase | |||
| 17945 | Fis family transcriptional regulator | |||
| 17950 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoJA03ORF17950P |
| 17955 | 59 aa hypothetical protein | |||