Burkholderia pseudomallei Pasteur 52237 |
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Putative Burkholderia pseudomallei Pasteur 52237 RM systems
Ref: Daligault,H.E. et al. Genome Announc 2 (6) (2014)
REBASE ref # 18633
| Sequence length: | GenBank #: | |
| Chromosome: | (contig set) | JPNT00000000 |
| chromosome 1: | 4,140,573 bp | CP009899 |
| chromosome 2: | 3,184,745 bp | CP009898 |
REBASE acronym: BpsBEM
Org_num: 14385
All begin DP47_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 714 | type I restriction modification DNA specificity | |||
| 715 | M | M2.Bth426III (93% identity) | CCCNNNNNCTTC | M2.BpsBEMII |
| 716 | 500 aa hypothetical protein | |||
| chromosome 1 | ||||
| 402 | PHP domain protein | |||
| 403 | R | ObaASO5ORF13945P (95% identity) | CCCNNNNNCTTC | BpsBEMIIP |
| 404 | S | S.Bps7509ORF3895P (95% identity) | CCCNNNNNCTTC | S.BpsBEMII |
| 405 | M | M2.Bth426III (93% identity) | CCCNNNNNCTTC | M2.BpsBEMII |
| 406 | M | M1.Bps7509ORF3895P (98% identity) | CCCNNNNNCTTC | M1.BpsBEMII |
| 407 | 65 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 75 | 221 aa hypothetical protein | |||
| 76 | M | M.BpsBEMORF3412P (100% identity) | M.BpsBEMORF76P | |
| 77 | DNA methylase family protein | |||
| 76 | C-5 cytosine-specific DNA methylase family | |||
| 77 | M | M.BpsBEMORF3413P (100% identity) | M.BpsBEMORF77P | |
| 78 | 93 aa hypothetical protein | |||
| 707 | transcription activator | |||
| ??? | M | M.BspBGKORF3228P (100% identity) | M.BpsBEMORF708P | |
| 710 | baseplate J-like family protein | |||
| 3512 | tryptophan synthase, alpha subunit | |||
| 3513 | M | M.BspBGKORF4324P (100% identity) | GTWWAC | M.BpsBEMIII |
| 3514 | tryptophan synthase, beta subunit | |||
| 1312 | phage baseplate assembly V family protein | |||
| ??? | M | M.BpsPhiBEKORF6012P (100% identity) | M.BpsBEMORF1313P | |
| 1314 | 167 aa hypothetical protein | |||
| 2189 | bacteriophage lysis protein | |||
| 2190 | M | M.BpsBEMORF1818P (100% identity) | M.BpsBEMORF2190P | |
| 2191 | Rhs element Vgr family protein | |||
| chromosome 1 | ||||
| 397 | transcription activator | |||
| ??? | M | M.BspBGKORF3228P (100% identity) | M.BpsBEMORF398P | |
| 400 | baseplate J-like family protein | |||
| 942 | phage baseplate assembly V family protein | |||
| 943 | M | DNA methylase family protein | M.BpsBEMORF943P | |
| 944 | 167 aa hypothetical protein | |||
| 1817 | bacteriophage lysis protein | |||
| 1818 | M | M.BpsBEMORF2190P (100% identity) | M.BpsBEMORF1818P | |
| 1819 | Rhs element Vgr family protein | |||
| 3411 | 221 aa hypothetical protein | |||
| 3412 | M | M.BpsBEMORF76P (100% identity) | M.BpsBEMORF3412P | |
| 3413 | DNA methylase family protein | |||
| 3411 | 221 aa hypothetical protein | |||
| 3412 | M | M.BpsBEMORF3412P (100% identity) | M.BpsBEMORF76P | |
| 3413 | DNA methylase family protein | |||
| 3412 | C-5 cytosine-specific DNA methylase family | |||
| 3413 | M | M.BpsBEMORF77P (100% identity) | M.BpsBEMORF3413P | |
| 3414 | 93 aa hypothetical protein | |||
| 3412 | C-5 cytosine-specific DNA methylase family | |||
| 3413 | M | M.BpsBEMORF3413P (100% identity) | M.BpsBEMORF77P | |
| 3414 | 93 aa hypothetical protein | |||
| chromosome 2 | ||||
| 5364 | tryptophan synthase, alpha subunit | |||
| 5365 | M | M.BspBGKORF4324P (100% identity) | GTWWAC | M.BpsBEMIII |
| 5366 | tryptophan synthase, beta subunit | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1126 | gram-negative porin family protein | |||
| ??? | M | M.BspBGKORF17P (100% identity) | CACAG | M.BpsBEMI |
| 1128 | R | BspBGKORF17P (100% identity) | CACAG | BpsBEMIP |
| 1129 | gram-negative porin family protein | |||
| chromosome 1 | ||||
| 813 | gram-negative porin family protein | |||
| ??? | M | M.BspBGKORF17P (100% identity) | CACAG | M.BpsBEMI |
| 815 | R | BspBGKORF17P (100% identity) | CACAG | BpsBEMIP |
| 816 | gram-negative porin family protein | |||