Escherichia coli VKPM B-10182 |
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Putative Escherichia coli VKPM B-10182 RM systems
Ref: Mardanov,A.V. et al. Genome Announc 2 (6) (2014)
REBASE ref # 18614
GenBank #: JRIA00000000
REBASE acronym: Eco10182
Org_num: 14423
All begin LJ08_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2864 | 42 aa hypothetical protein | |||
| 2865 | M | M.EcohubtORF19935P (100% identity) | M.Eco10182ORF2865P | |
| 2866 | restriction modification system DNA specificity | |||
| 2865 | N-6 DNA methylase | |||
| 2866 | S | S.SflN101ORF11895P (99% identity) | S.Eco10182ORF2866P | |
| 2867 | 428 aa hypothetical protein | |||
| 2887 | transcriptional regulator yfjR | |||
| ??? | R | EcohubtORF20055P (99% identity) | Eco10182ORF2890P | |
| 2890 | M | M.EcohubtORF20055P (100% identity) | M.Eco10182ORF2890P | |
| 2891 | S | S.EcohubtORF20055P (90% identity) | S.Eco10182ORF2890P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4663 | Phage protein | |||
| 4664 | M | M.EcosE2ORF21575P (99% identity) | GGCC | M.Eco10182ORF4664P |
| 4665 | Phage protein | |||
| 2419 | 37 aa hypothetical protein | |||
| 2420 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco10182ORF2420P |
| 2421 | DNA-binding protein Fis | |||
| 4300 | Phage NinX | |||
| 4301 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco10182ORF4301P |
| 4302 | Protein NinB | |||
| 4038 | Phage protein | |||
| 4039 | M | M.EcohubtORF7795P (100% identity) | GATC | M.Eco10182ORF4039P |
| 4040 | Phage replication protein | |||
| 1446 | Ribulose-phosphate 3-epimerase | |||
| 1447 | M | Methyl-directed repair DNA adenine methylase | GATC | M.Eco10182DamP |
| 1448 | DamX, an inner membrane protein involved in bile | |||
| 3573 | 41 aa hypothetical protein | |||
| 3574 | M | M.Sso8ORF23800P (100% identity) | M.Eco10182ORF3574P | |
| 3575 | cytoplasmic protein | |||
| 3113 | metal-dependent phosphohydrolase | |||
| 3114 | M | DNA-cytosine methyltransferase | CCWGG | M.Eco10182DcmP |
| 3115 | V | V.SsoSE61DcmP (100% identity) | V.Eco10182DcmP | |
| 3116 | Permease of the drug/metabolite transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2860 | 301 aa hypothetical protein | |||
| 2861 | R | 327 aa hypothetical protein | Eco10182McrB2P | |
| 2862 | 321 aa hypothetical protein | |||
| 2861 | 327 aa hypothetical protein | |||
| 2862 | R | SflN101McrBP (46% identity) | Eco10182McrBP | |
| 2863 | R | EcohubtMcrCP (100% identity) | Eco10182McrCP | |
| 2864 | 42 aa hypothetical protein | |||