Alteromonas species LTR |
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Putative Alteromonas species LTR RM systems
Ref: Kopel,M. et al. Genome Announc 2 (5) (2014)
REBASE ref # 18412
Contig set: 4,409,863 bp
GenBank #: JQHG00000000 (NZ_JQHG00000000)
REBASE acronym: AspLTR
Org_num: 14064
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | AspLORORFCP (100% identity) | AspLTRORFCP | |
| ??? | S | S.AspLORORFCP (100% identity) | S.AspLTRORFCP | |
| ??? | M | M.AspLORORFCP (100% identity) | M.AspLTRORFCP | |
| ??? | R | AspLORORFAP (100% identity) | AspLTRORFAP | |
| ??? | R | AspLORORFDP (100% identity) | AspLTRORFDP | |
| ??? | S | S.AspLORORFDP (100% identity) | S.AspLTRORFDP | |
| ??? | M | M.AspLORORFDP (100% identity) | M.AspLTRORFDP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.AspLORDamP (100% identity) | GATC | M.AspLTRDamP |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | type III restriction protein res subunit | |||
| ??? | R | AspLORMrrP (100% identity) | AspLTRMrrP | |
| ??? | R | AspLORORFBP (100% identity) | AspLTRORFBP | |
| ??? | restriction system protein | |||