Burkholderia pseudomallei MSHR1153 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Burkholderia pseudomallei MSHR1153 RM systems
Ref: Bunnell,A. et al. unpublished
REBASE ref # 18543
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,032,226 bp | CP009271 |
| chromosome 2: | 3,280,677 bp | CP009272 |
REBASE acronym: Bps1153
Org_num: 14157
All begin Y603_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2466 | 212 aa hypothetical protein | |||
| 2467 | R | BpsV44ORF3360P (100% identity) | Bps1153ORF2469P | |
| 2468 | S | S.BpsR640ORF4796P (99% identity) | S.Bps1153ORF2469P | |
| 2469 | M | M.BpsR640ORF4796P (100% identity) | M.Bps1153ORF2469P | |
| 2470 | 321 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1680 | helix-turn-helix domain protein | |||
| 1681 | M | M.Bps7498ORF6066P (100% identity) | M.Bps1153ORF1681P | |
| 1682 | integrase core domain protein | |||
| 1911 | 319 aa hypothetical protein | |||
| 1912 | M | M.Bps5609ORF237P (100% identity) | M.Bps1153ORF1912P | |
| 1913 | AAA domain protein | |||
| 2459 | TENA/THI-4/PQQC family protein | |||
| 2460 | M | M.BpsBDZORF471P (100% identity) | M.Bps1153ORF2460P | |
| 2461 | phage tail protein I | |||
| 2872 | integrase core domain protein | |||
| 2873 | M | M.BpsHAORFAP (100% identity) | ACCGGT | M.Bps1153ORF2873P |
| 2874 | 550 aa hypothetical protein | |||
| chromosome 2 | ||||
| 4221 | tryptophan synthase, alpha subunit | |||
| 4222 | M | M.BspBGKORF4324P (100% identity) | GTWWAC | M.Bps1153ORF4222P |
| 4223 | tryptophan synthase, beta subunit | |||
| 4988 | AAA domain protein | |||
| 4989 | M | M.RmeAORF2828P (77% identity) | ACGGC | M.Bps1153ORF4989P |
| 4990 | 554 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2835 | gram-negative porin family protein | |||
| ??? | M | M.BpsW107ORF1669P (100% identity) | CACAG | M.Bps1153ORF2836P |
| 2837 | R | BpsR668IP (99% identity) | CACAG | Bps1153ORF2836P |
| 2838 | gram-negative porin family protein | |||