Serratia species DD3 |
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Putative Serratia species DD3 RM systems
Ref: Poehlein,A. et al. Genome Announc 2 (5), e00903-14 (2014)
REBASE ref # 18250
Contig set: 4,457,017 bp
GenBank #: AYKS00000000 (NZ_AYKS00000000)
REBASE acronym: SspDD3
Org_num: 13899
All begin SRDD_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11830 | 271 aa hypothetical protein | |||
| 11840 | M | M.Yru11076ORF1585P (95% identity) | M.SspDD3ORF11840P | |
| 11850 | S | S.EcoMB52ORF17080P (54% identity) | S.SspDD3ORF11840P | |
| 11860 | 395 aa hypothetical protein | |||
| 11870 | R | Yru11076ORF1585P (97% identity) | SspDD3ORF11840P | |
| 11880 | 248 aa hypothetical protein | |||
| 39840 | 52 aa hypothetical protein | |||
| 39850 | R | EspLSJC7ORFEP (86% identity) | SspDD3ORF39870P | |
| 39860 | adenosine monophosphate-protein transferase | |||
| 39870 | M | M.Omu33336ORF7045P (88% identity) | M.SspDD3ORF39870P | |
| 39880 | S | S.Ano1395ORF16200P (70% identity) | S.SspDD3ORF39870P | |
| 39890 | DNA polymerase IV | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8150 | 554 aa hypothetical protein | |||
| 8160 | M | M.Psp67ORF1762P (78% identity) | ACCGGT | M.SspDD3ORF8160P |
| 8170 | 72 aa hypothetical protein | |||
| 12150 | 72 aa hypothetical protein | |||
| 12160 | M | M.Psp67ORF1762P (78% identity) | ACCGGT | M.SspDD3ORF8160P |
| 12170 | 554 aa hypothetical protein | |||
| 15720 | lysine--tRNA ligase | |||
| 15740 | M | M.Eta9501ORF7600P (83% identity) | M.SspDD3ORF15740P | |
| 15750 | 91 aa hypothetical protein | |||
| 21640 | 577 aa hypothetical protein | |||
| 21650 | M | M.Ddi980ORFHP (79% identity) | M.SspDD3ORF21650P | |
| 21660 | R | Yps581ORF940P (77% identity) | SspDD3ORF21650P | |
| 21670 | 568 aa hypothetical protein | |||
| 23600 | cell division protein DamX | |||
| 23610 | M | M.SspS1BDamP (95% identity) | GATC | M.SspDD3DamP |
| 23620 | ribulose-phosphate 3-epimerase | |||
| 27240 | 61 aa hypothetical protein | |||
| 27250 | M | M2.Sen1529ORF9635P (64% identity) | GATC | M.SspDD3ORF27250P |
| 27260 | crossover junction endodeoxyribonuclease RusA | |||
| 27310 | 162 aa hypothetical protein | |||
| 27320 | M | M.SspV004ORF12910P (78% identity) | M.SspDD3ORF27320P | |
| 27330 | 142 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8140 | transposase | |||
| 8150 | R | 554 aa hypothetical protein | SspDD3McrBP | |
| 8160 | modification methylase HaeIII | |||
| 12160 | modification methylase HaeIII | |||
| 12170 | R | 554 aa hypothetical protein | SspDD3McrBP | |
| 12180 | transposase | |||