Escherichia coli O157:H7 EDL933 |
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Putative Escherichia coli O157:H7 EDL933 RM systems
Ref: Latif,H. et al. unpublished
REBASE ref # 18119
| Sequence length: | GenBank #: | |
| Chromosome: | 5,547,323 bp | CP008957 |
| plasmid unnamed: | 92,076 bp | CP008958 |
REBASE acronym: Eco933
Org_num: 13422
All begin EDL933_, EDL933_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5688 | 113 aa hypothetical protein | |||
| 5689 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco933I |
| 5690 | M | M.EcoX21ORF4993P (100% identity) | CACNNNNNNNCTGG | M.Eco933I |
| 5691 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco933IP |
| 5692 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1375 | Protein NinB | |||
| 1376 | M | M.SflN97ORF8425P (100% identity) | GATC | M.Eco933ORF1376P |
| 1377 | 347 aa hypothetical protein | |||
| 1983 | 106 aa unknown protein encoded by prophage CP-933O | |||
| 1984 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco933ORF1984P | |
| 1985 | 617 aa Hypothetical protein | |||
| 2304 | Phage protein | |||
| 2305 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco933ORF2305P | |
| 2306 | Phage protein | |||
| 2967 | Permease of the drug/metabolite transporter | |||
| 2968 | V | V.EcosPA8DcmP (100% identity) | V.Eco933DcmP | |
| 2969 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco933DcmP |
| 2970 | metal-dependent phosphohydrolase | |||
| 3249 | 133 aa hypothetical protein | |||
| 3250 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco933ORF3250P |
| 3251 | Protein NinB | |||
| 4483 | DNA-binding protein Fis | |||
| 4484 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco933ORF4484P |
| 4485 | periplasmic protein | |||
| 4584 | Ribulose-phosphate 3-epimerase | |||
| 4585 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco933DamP |
| 4586 | DamX, an inner membrane protein involved in bile | |||
| 5637 | ATP-dependent helicase | |||
| 5638 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco933II |
| plasmid unnamed | ||||
| 70 | 41 aa hypothetical protein | |||
| 71 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco933ORF71P | |
| 72 | cytoplasmic protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5685 | 54 aa hypothetical protein | |||
| 5686 | R | Ecos1613GmrSP (100% identity) | Eco933GmrSP | |
| 5687 | R | EcosPA8GmrSDP (55% identity) | Eco933GmrDP | |
| 5688 | 113 aa hypothetical protein | |||
| 5685 | 54 aa hypothetical protein | |||
| 5686 | R | Ecos1613GmrSP (100% identity) | Eco933GmrS2P | |
| 5687 | R | EcosPA8GmrSDP (55% identity) | Eco933GmrD2P | |
| 5688 | 113 aa hypothetical protein | |||