Escherichia coli Nissle 1917 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli Nissle 1917 RM systems
Ref: Liang,C. et al. unpublished
REBASE ref # 15798
Complete sequence: 5,441,200 bp
GenBank #: CP007799
REBASE acronym: Eco1917
Org_num: 10459
All begin ECOLIN_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24165 | endoribonuclease SymE | |||
| 24170 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco1917ORF24180P |
| 24175 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco1917ORF24180P |
| 24180 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco1917ORF24180P |
| 24185 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6550 | 146 aa hypothetical protein | |||
| ??? | M | M.EcoleORFAP (100% identity) | GATC | M.Eco1917ORF6555P |
| 6560 | protein ninE | |||
| 10190 | holin | |||
| 10195 | M | M.EcoZE21ORF10265P (100% identity) | M.Eco1917ORF10195P | |
| 10200 | 63 aa hypothetical protein | |||
| 10235 | crossover junction endodeoxyribonuclease | |||
| 10240 | M | M.EcoZE21ORF10305P (100% identity) | M.Eco1917ORF10240P | |
| 10245 | GntR family transcriptional regulator | |||
| 10775 | multidrug DMT transporter | |||
| 10780 | V | V.EcosC25DcmP (100% identity) | V.Eco1917DcmP | |
| 10785 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco1917DcmP |
| 10790 | hydrolase | |||
| 18090 | Fis family transcriptional regulator | |||
| 18095 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco1917ORF18095P |
| 18100 | 59 aa hypothetical protein | |||
| 18705 | ribulose-phosphate 3-epimerase | |||
| 18710 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1917DamP |
| 18715 | cell division protein DamX | |||
| 26285 | restriction endonuclease | |||
| 26290 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco1917ORF26295P |
| 26295 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco1917ORF26295P |
| ??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.Eco1917ORF26295P |
| 26305 | transposase | |||