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Putative Ralstonia solanacearum GMI1000 RM systems
Ref: Salanoubat,M. et al. Nature 415 (6871), 497-502 (2002)
REBASE ref # 7145
Sequence length: | GenBank #: | |
chromosome: | 3,716,413 bp | AL646052 (NC_003295) |
plasmid pGMI1000MP: | 2,094,509 bp | AL646053 (NC_003296) |
REBASE acronym: Rso
Org_num: 3337
All begin RSc, RSp
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome | ||||
3393 | isrso5-transposase protein | |||
3394 | R | RpsPSS4ORFGP (88% identity) | RsoORF3394P | |
3395 | 284 aa conserved hypothetical protein | |||
3396 | M | M.RpsPSS4ORFGP (100% identity) | M.RsoORF3394P | |
3397 | of unknown function upf0074; | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome | ||||
843 | irso9 transposase protein | |||
844 | M | M1.Rps476ORF4330P (100% identity) | M1.RsoORF844P | |
845 | M | M2.RpsPSS4ORFAP (100% identity) | M2.RsoORF844P | |
846 | 111 aa hypothetical protein | |||
868 | type III effector protein popp2 | |||
??? | M | M.RsoUW763ORF6690P (51% identity) | M.RsoORF869P | |
870 | 178 aa hypothetical protein | |||
1981 | probable tryptophan synthase alpha chain | |||
1982 | M | M.Rsp650ORF7450P (100% identity) | GTWWAC | M.RsoI |
1983 | probable tryptophan synthase beta chain protein | |||
3437 | galactose mutarotase-like protein | |||
3438 | M | M.RpsPSS4ORFCP (100% identity) | M.RsoORF3438P | |
3439 | V | V.RpsPSS4ORFCP (100% identity) | V.RsoORF3438P | |
3440 | probable dna gyrase (subunit b) protein | |||
plasmid pGMI1000MP | ||||
569 | 190 aa hypothetical protein | |||
??? | M | M.Rps476ORF20455P (73% identity) | M.RsoORF570P | |
572 | type III effector protein |