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Putative Serpentinomonas mccroryi B1 RM systems
Ref: Suzuki,S. et al. Nat Commun (2014) In press
REBASE ref # 17593
Complete sequence: 2,606,868 bp
GenBank #: AP014569
REBASE acronym: SmcB1
Org_num: 12931
All begin SMCB_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3 | type IIA topoisomerase | |||
4 | M | M.VspLIG4ORF1003P (85% identity) | M.SmcB1ORF4P | |
5 | S | S.Rpu633ORF25705P (56% identity) | S.SmcB1ORF4P | |
6 | 336 aa hypothetical protein | |||
7 | prophage maintenance system killer protein | |||
8 | R | Tsp3ORF3474P (78% identity) | SmcB1ORF4P | |
9 | 639 aa hypothetical protein | |||
627 | virulence protein | |||
628 | R | Ath19377ORFBP (91% identity) | SmcB1ORF631P | |
629 | uncharacterized conserved protein | |||
630 | S | S.TspS2ORFCP (56% identity) | S.SmcB1ORF631P | |
631 | M | M.Bge22978ORF12835P (90% identity) | M.SmcB1ORF631P | |
632 | cAMP-binding protein - catabolite gene activator | |||
911 | phage-related protein | |||
912 | R | Tsp3ORF612P (76% identity) | SmcB1ORF915P | |
913 | predicted NTPase | |||
914 | S | S.Sna507IV (54% identity) | S.SmcB1ORF915P | |
915 | M | M.RguNS21ORF45P (87% identity) | M.SmcB1ORF915P | |
916 | sulfate permease and related transporters | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
224 | uncharacterized conserved protein | |||
225 | RM | CspZM22ORF14565P (71% identity) | SmcB1ORF225P | |
226 | predicted ATPase AAA+ superfamily | |||
665 | GTPase subunit of restriction endonuclease | |||
666 | V | V.BpsHAORFAP (69% identity) | V.SmcB1ORF666P | |
667 | adenylosuccinate lyase | |||
668 | GTPase subunit of restriction endonuclease | |||
669 | M | M.Csp2512ORFEP (85% identity) | ACCGGT | M.SmcB1ORF669P |
670 | predicted transcriptional regulators containing | |||
704 | 122 aa hypothetical protein | |||
705 | M | M1.AfeV8ORF8635P (92% identity) | M1.SmcB1ORF705P | |
706 | M | M1.SplGro7ORF20490P (81% identity) | M2.SmcB1ORF705P | |
707 | miscellaneous; hypothetical/global homology | |||
1705 | tryptophanyl-tRNA synthetase | |||
1706 | M | DNA modification methylase | M.SmcB1ORF1706P | |
1707 | restriction endonuclease | |||
1998 | DnaJ-class molecular chaperone with C-terminal | |||
??? | M | M.HspNH16ORFEP (75% identity) | M.SmcB1ORF1999P | |
2001 | uncharacterized conserved protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
636 | uncharacterized conserved protein | |||
637 | R | BhiL60ORF2246P (92% identity) | SmcB1ORF638P | |
638 | M | M.BhiL60ORF2246P (94% identity) | M.SmcB1ORF638P | |
639 | 68 aa hypothetical protein | |||
1485 | predicted rRNA methylase, SpoU class | |||
1486 | R | Cli1677ORF4285P (70% identity) | SmcB1ORF1487P | |
??? | M | M.RspORNL1ORF27960P (51% identity) | M.SmcB1ORF1487P | |
1488 | predicted amidophosphoribosyltransferase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
1756 | 83 aa hypothetical protein | |||
1757 | R | AteAA22MrrP (77% identity) | SmcB1MrrP | |
1758 | uncharacterized conserved protein |