Salmonella enterica subsp. enterica serovar Give var. 15 CFSAN004343 |
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Putative Salmonella enterica subsp. enterica serovar Give var. 15 CFSAN004343 RM systems
Ref: Timme,R.E. et al. unpublished
REBASE ref # 17513
Contig set: 4,972,238 bp
GenBank #: AYUQ00000000 (NZ_AYUQ00000000)
REBASE acronym: Sen4343
Org_num: 12892
All begin CFSAN004343_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20125 | endoribonuclease SymE | |||
| 20130 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen4343ORF20135P |
| 20135 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen4343ORF20135P |
| 20140 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen4343ORF20135P |
| 20145 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3460 | 131 aa hypothetical protein | |||
| 3465 | M | M.Ssp15303ORFAP (100% identity) | M.Sen4343ORF3465P | |
| 3470 | 149 aa hypothetical protein | |||
| 23135 | ribulose-phosphate 3-epimerase | |||
| 23140 | M | M.StyTDamP (100% identity) | GATC | M.Sen4343DamP |
| 23145 | cell division protein DamX | |||
| 24030 | 73 aa hypothetical protein | |||
| 24035 | M | M.StyUK1ORFAP (100% identity) | M.Sen4343ORF24035P | |
| 24040 | 62 aa hypothetical protein | |||
| 2415 | multidrug transporter | |||
| 2420 | V | V.StyUK1DcmP (100% identity) | V.Sen4343DcmP | |
| 2425 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen4343DcmP |
| 2430 | hydrolase | |||
| 24890 | Fis family transcriptional regulator | |||
| 24895 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4343ORF24895P |
| 24900 | 54 aa hypothetical protein | |||
| 19980 | spermidine/putrescine ABC transporter ATPase | |||
| 19985 | RM | StyUK1IV (100% identity) | GATCAG | Sen4343ORF19985P |
| 19990 | DNA repair ATPase | |||
| 14935 | 414 aa hypothetical protein ECZU24_43920 | |||
| 14940 | M | M.Sens29958ORF5585P (100% identity) | M.Sen4343ORF14940P | |
| 14945 | ATPase AAA | |||
| 15010 | GntR family transcriptional regulator | |||
| 15015 | M | M.Sens29958ORF5665P (100% identity) | GATC | M.Sen4343ORF15015P |
| 15020 | crossover junction endodeoxyribonuclease | |||
| 2645 | crossover junction endodeoxyribonuclease | |||
| 2650 | M | M.StyUK1V (100% identity) | GATC | M.Sen4343ORF2650P |
| 2655 | 160 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22575 | sugar transporter | |||
| 22580 | M | M.Sens29958ORF17880P (100% identity) | CAGAG | M.Sen4343ORF22580P |
| 22585 | R | StyUK1IP (99% identity) | CAGAG | Sen4343ORF22580P |
| 22590 | cytochrome D ubiquinol oxidase subunit I | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20140 | DEAD/DEAH box helicase | |||
| 20145 | R | StyUK1MrrP (100% identity) | Sen4343MrrP | |
| 20150 | membrane protein | |||