Salmonella enterica subsp. enterica serovar Enteritidis 3402 |
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Putative Salmonella enterica subsp. enterica serovar Enteritidis 3402 RM systems
Ref: Timme,R.E. et al. unpublished
REBASE ref # 17513
Contig set: 4,912,750 bp
GenBank #: AYVI00000000 (NZ_AYVI00000000)
REBASE acronym: Sen1333
Org_num: 12908
All begin SEEE3402_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5990 | multidrug transporter | |||
| 5995 | V | very short patch repair endonuclease | V.Sen1333DcmP | |
| 6000 | M | M.Ssp918DcmP (100% identity) | CCWGG | M.Sen1333DcmP |
| 6005 | hydrolase | |||
| 12190 | endonuclease | |||
| 12195 | M | M.SenS224ORF5510P (100% identity) | GATC | M.Sen1333ORF12195P |
| 12200 | 75 aa hypothetical protein | |||
| 11670 | Pyocin large subunit | |||
| 11675 | M | M.SenM4441ORF6385P (100% identity) | GATC | M.Sen1333ORF11675P |
| 11680 | 67 aa hypothetical protein | |||
| 18905 | 73 aa hypothetical protein | |||
| 18910 | M | M.Sens29856ORF22725P (100% identity) | M.Sen1333ORF18910P | |
| 18915 | DNA breaking-rejoining protein | |||
| 7665 | protein ninE | |||
| 7670 | M | M.Sens24230ORF16970P (100% identity) | GATC | M.Sen1333ORF7670P |
| 7675 | ninB protein | |||
| 9415 | crossover junction endodeoxyribonuclease | |||
| 9420 | M | M.StyUK1V (100% identity) | GATC | M.Sen1333ORF9420P |
| 9425 | 160 aa hypothetical protein | |||
| 14285 | peptidase | |||
| ??? | M | M.SenU1590ORF11730P (100% identity) | M.Sen1333ORF14290P | |
| 14295 | lysozyme | |||
| 22975 | replication protein | |||
| 22980 | M | M.Sen1314ORF22145P (100% identity) | GATC | M.Sen1333ORF22980P |
| 22985 | 129 aa hypothetical protein | |||
| 7960 | cell division protein DamX | |||
| 7965 | M | DNA adenine methylase | GATC | M.Sen1333DamP |
| 7970 | ribulose-phosphate 3-epimerase | |||
| 17705 | DNA helicase | |||
| 17710 | M | M.Ssp918ORF19230P (100% identity) | CCWGG | M.Sen1333ORF17710P |
| 17715 | R | Ssp918ORF19230P (99% identity) | CCWGG | Sen1333ORF17710P |
| 17720 | 77 aa hypothetical protein | |||
| 16350 | 82 aa hypothetical protein | |||
| 16355 | M | M.Sens29945ORF7970P (100% identity) | GATC | M.Sen1333ORF16355P |
| 16360 | methyltransferase | |||
| 13125 | Fis family transcriptional regulator | |||
| 13130 | M | methyltransferase | ATGCAT | M.Sen1333ORF13130P |
| 13135 | 54 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12140 | cytochrome D ubiquinol oxidase subunit I | |||
| 12145 | R | Sens8899ORF17105P (99% identity) | CAGAG | Sen1333ORF12150P |
| 12150 | M | M.Sens24230ORF17980P (100% identity) | CAGAG | M.Sen1333ORF12150P |
| 12155 | sugar transporter | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11725 | 99 aa hypothetical protein | |||
| ??? | M | M.Sen4343ORF6090P (100% identity) | GATC | M.Sen1333ORF11730P |
| 11740 | 62 aa hypothetical protein | |||