Salmonella enterica subsp. enterica serovar Typhi STH2370 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhi STH2370 RM systems
Ref: Valenzuela,C. et al. Genome Announc 2 (1), e00104-14 (2014)
REBASE ref # 17187
GenBank #: JABZ00000000
REBASE acronym: Sen2370
Org_num: 12320
All begin AA09_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15910 | endoribonuclease SymE | |||
| 15915 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen2370ORFAP |
| 15920 | M | M.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | M.Sen2370ORFAP |
| 15925 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen2370ORFAP |
| 15930 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11535 | pseudogene | |||
| 11540 | M | M.StyTORF4329P (100% identity) | GATC | M.Sen2370ORF11540P |
| 11545 | 3-5 exonuclease | |||
| 10145 | multidrug transporter | |||
| 10150 | V | V.StyTDcmP (100% identity) | V.Sen2370DcmP | |
| 10155 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen2370DcmP |
| 10160 | hydrolase | |||
| 15300 | Fis family transcriptional regulator | |||
| 15305 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen2370ORF15305P |
| 15310 | 54 aa hypothetical protein | |||
| 12665 | 75 aa hypothetical protein | |||
| 12670 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen2370ORF12670P |
| 12675 | replication endonuclease | |||
| 23190 | 79 aa hypothetical protein | |||
| 23195 | M | M.StyTORF1926P (100% identity) | GATC | M.Sen2370ORF23195P |
| 23200 | 354 aa hypothetical protein | |||
| 23255 | 174 aa hypothetical protein | |||
| 23260 | M | M.StyTORF1914P (100% identity) | M.Sen2370ORF23260P | |
| 23265 | eaa protein | |||
| 1615 | cell division protein DamX | |||
| 1620 | M | DNA adenine methylase | GATC | M.Sen2370DamP |
| 1625 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8445 | sugar transporter | |||
| 8450 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen2370ORF8450P |
| 8455 | R | StyTORF2507P (99% identity) | CAGAG | Sen2370ORF8450P |
| 8460 | cytochrome D ubiquinol oxidase subunit I | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15925 | DEAD/DEAH box helicase | |||
| 15930 | R | StyTMrrP (100% identity) | Sen2370MrrP | |
| 15935 | membrane protein | |||