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Putative Xylella fastidiosa 32 RM systems
Ref: Alencar,V.C. et al. Genome Announc 2 (1) (2014)
REBASE ref # 17018
Contig set: 2,607,546 bp
GenBank #: AWYH00000000 (NZ_AWYH00000000)
REBASE acronym: XfaXf32
Org_num: 12190
All begin B398_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1285 | bifunctional aconitate hydratase | |||
1300 | R | XfaFb7ORF8270P (100% identity) | XfaXf32ORFAP | |
1305 | S | S.XfaFb7ORF8270P (100% identity) | S.XfaXf32ORFAP | |
??? | M | M.Xfa3124ORF12650P (65% identity) | M.XfaXf32ORFAP | |
1320 | 68 aa hypothetical protein | |||
12300 | pseudogene | |||
12305 | R | XfaORF2723P (99% identity) | XfaXf32ORF12315P | |
12310 | S | S.Xfa3124ORF12265P (100% identity) | S.XfaXf32ORF12315P | |
12315 | M | M.Xfa3124ORF12265P (88% identity) | M.XfaXf32ORF12315P | |
12320 | DEAD/DEAH box helicase | |||
12315 | N-6 DNA methylase:Type I restriction-modification system, M subunit | |||
12320 | R | XfaFb7ORF9900P (98% identity) | XfaXf32ORF12335P | |
12325 | S | S.Xfa3124ORF12285P (100% identity) | S.XfaXf32ORF12335P | |
12330 | pseudogene | |||
12335 | M | M.Xfa3124ORF12285P (100% identity) | M.XfaXf32ORF12335P | |
12340 | threonine transporter RhtB | |||
12380 | 108 aa hypothetical protein | |||
12385 | R | Xfa3124ORF12360P (100% identity) | XfaXf32ORF12400P | |
12395 | S | S.Xfa3124ORF12360P (100% identity) | S.XfaXf32ORF12400P | |
12400 | M | M.Xfa3124ORF12360P (100% identity) | M.XfaXf32ORF12400P | |
12405 | 51 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
10145 | DNA methyltransferase | |||
10150 | M | M.XfaXf6cORF10320P (100% identity) | M.XfaXf32ORF10150P | |
10155 | 83 aa hypothetical protein | |||
6275 | 47 aa hypothetical protein | |||
6285 | M | M.XfaXf6cORF5915P (100% identity) | GCATGC | M.XfaXf32ORF6285P |
6290 | 190 aa hypothetical protein | |||
4250 | pseudogene | |||
4255 | M | M.Xfa3124ORFAP (100% identity) | M.XfaXf32ORF4255P | |
4260 | 232 aa hypothetical protein | |||
6445 | group II intron reverse transcriptase/maturase | |||
6455 | M | M.Xfa3124ORF6255P (78% identity) | M.XfaXf32ORF6455P | |
6460 | 252 aa hypothetical protein | |||
2520 | 80 aa hypothetical protein | |||
2525 | R | XfaFb7ORF6925P (100% identity) | CGTACG | XfaXf32ORF2530P |
2530 | M | M.XfaORF641P (100% identity) | CGTACG | M.XfaXf32ORF2530P |
2540 | 30 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
5185 | 3-oxoacyl-ACP synthase | |||
5190 | M | M.XfaFb7ORF4245P (100% identity) | M.XfaXf32ORF5190P | |
5195 | R | XfaFb7ORF4245P (100% identity) | XfaXf32ORF5190P | |
5205 | ferredoxin |