Burkholderia pseudomallei MSHR146 |
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Putative Burkholderia pseudomallei MSHR146 RM systems
Ref: Tuanyok,A. et al. unpublished
REBASE ref # 15966
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,067,985 bp | CP004042 |
| chromosome 2: | 3,245,118 bp | CP004043 |
REBASE acronym: Bps146
Org_num: 12117
All begin BBN_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2619 | 127 aa hypothetical protein | |||
| 2620 | M | M.BpsW30ORF2481P (100% identity) | M.Bps146ORF2620P | |
| 2621 | S | S.BpsW30ORF2481P (100% identity) | S.Bps146ORF2620P | |
| 2622 | 310 aa hypothetical protein | |||
| 2623 | R | BpsB16ORF561P (100% identity) | Bps146ORF2620P | |
| 2624 | phage integrase/recombinase protein | |||
| chromosome 2 | ||||
| 3787 | 51 aa hypothetical protein | |||
| ??? | M | M.BpsB16ORF5769P (100% identity) | M.Bps146ORF3788P | |
| 3789 | S | S.BpsB16ORF5769P (90% identity) | S.Bps146ORF3788P | |
| 3790 | integrase core domain protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 303 | baseplate J-like family protein | |||
| 304 | M | M.BpsB16ORF1784P (100% identity) | M.Bps146ORF304P | |
| 305 | transcription activator | |||
| 1194 | gp26a | |||
| 1195 | M | M.BpsB16ORF2678P (100% identity) | M.Bps146ORF1195P | |
| 1196 | 236 aa hypothetical protein | |||
| 2124 | gp27 | |||
| 2125 | M | M.BpsBP07ORF10095P (100% identity) | M.Bps146ORF2125P | |
| 2126 | bacteriophage lysis protein | |||
| chromosome 2 | ||||
| 5150 | tryptophan synthase, alpha subunit | |||
| 5151 | M | M.BspBGKORF4324P (100% identity) | GTWWAC | M.Bps146ORF5151P |
| 5152 | tryptophan synthase, beta subunit | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3481 | gram-negative porin family protein | |||
| 3482 | R | BpsB16ORF1428P (100% identity) | CACAG | Bps146ORF3483P |
| ??? | M | M.BpsW107ORF1669P (100% identity) | CACAG | M.Bps146ORF3483P |
| 3484 | gram-negative porin family protein | |||