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Putative Escherichia coli O145:H28 RM13514 RM systems
Ref: Cooper,K.K. et al. unpublished
REBASE ref # 16989
Sequence length: | GenBank #: | |
Chromosome: | 5,585,613 bp | CP006027 |
plasmid pO145-13514: | 87,120 bp | CP006028 |
REBASE acronym: Eco13514
Org_num: 12042
All begin ECRM13514_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2426 | IS600 orfA | |||
2427 | R | EcoSO173ORF28895P (89% identity) | GATGNNNNNNTAC | Eco13514ORFBP |
2428 | 594 aa hypothetical protein | |||
2429 | metal-binding protein | |||
2430 | S | S.EcoSO173ORF28895P (100% identity) | GATGNNNNNNTAC | S.Eco13514ORFBP |
??? | M | M.EcoE115ORF2574P (100% identity) | GATGNNNNNNTAC | M.Eco13514ORFBP |
2432 | IS629 orfA | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
821 | gene 54 protein | |||
822 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco13514ORF3488P |
823 | Phage NinB DNA recombination | |||
2046 | 39 aa hypothetical protein | |||
2047 | M | M.EcoDEC11CORF5871P (100% identity) | M.Eco13514ORF2047P | |
2048 | 65 aa unknown protein encoded by prophage CP-933O | |||
2515 | Permease of the drug/metabolite transporter | |||
2516 | V | V.SsoSE61DcmP (100% identity) | V.Eco13514DcmP | |
2517 | M | M.EcoXJ63DcmP (100% identity) | CCWGG | M.Eco13514DcmP |
2518 | metal-dependent phosphohydrolase | |||
2699 | Phage NinF | |||
??? | M | M.EcoPM7ORF21570P (100% identity) | GATC | M.Eco13514ORFAP |
2701 | Phage NinB DNA recombination | |||
3158 | repressor protein CI | |||
3159 | M | M.EcoE2863ORF2986P (100% identity) | CTGCAG | M.Eco13514I |
3160 | R | EcoF690ORF30660P (100% identity) | CTGCAG | Eco13514IP |
3161 | GepA protein | |||
3181 | 118 aa hypothetical protein | |||
3182 | M | M.Sso1099ORF735P (100% identity) | GATC | M.Eco13514ORF3182P |
3183 | 70 aa hypothetical protein | |||
4214 | DNA-binding protein Fis | |||
4215 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco13514ORF4215P |
4216 | periplasmic protein | |||
4330 | Ribulose-phosphate 3-epimerase | |||
4331 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco13514DamP |
4332 | Inner membrane protein DamX | |||
4993 | 150 aa hypothetical protein | |||
4994 | M | M.SflFF35ORF20P (100% identity) | GGCC | M.Eco13514ORF4994P |
4995 | 330 aa hypothetical protein | |||
5189 | 38 aa hypothetical protein | |||
??? | M | M.EcoSO179ORF27060P (100% identity) | M.Eco13514ORF5190P | |
5191 | 166 aa hypothetical protein | |||
5204 | 83 aa hypothetical protein | |||
5205 | M | M.EcoSTEC411ORF14855P (100% identity) | GATC | M.Eco13514ORF5205P |
5206 | phage repressor protein | |||
5544 | ATP-dependent helicase | |||
5545 | RM | EcoSO172ORF1005P (100% identity) | Eco13514ORF5545AP | |
5546 | IS629 orfA | |||
5547 | Transposase | |||
??? | RM | primase-helicase zinc-binding domain-containing protein | Eco13514ORF5545BP | |
plasmid pO145-13514 | ||||
5729 | 41 aa hypothetical protein | |||
5730 | M | M.EcopO26ORF185P (100% identity) | M.Eco13514ORF5730P | |
5731 | cytoplasmic protein |