Pantoea species AS-PWVM4 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pantoea species AS-PWVM4 RM systems
Ref: Khatri,I. et al. Genome Announc 1 (6), e00947-13 (2013)
REBASE ref # 16928
Contig set: 4,990,872 bp
GenBank #: ASZC00000000 (NZ_ASZC00000000)
REBASE acronym: PspVM4
Org_num: 11919
All begin L579_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3728 | DNA helicase related protein | |||
| 3729 | R | PspMSR2ORF11495P (99% identity) | PspVM4ORF3730P | |
| 3730 | M | M.PspMSR2ORF11495P (99% identity) | M.PspVM4ORF3730P | |
| 3731 | S | S1.Yru492ORF14085P (62% identity) | S.PspVM4ORF3730P | |
| 3732 | 367 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 247 | 76 aa hypothetical protein | |||
| 248 | M | M.PspNIH1ORF3220P (72% identity) | GATC | M.PspVM4ORF248P |
| 249 | Phage replication protein | |||
| 663 | Ribulose-phosphate 3-epimerase | |||
| 664 | M | M.PspMSR2DamP (100% identity) | GATC | M.PspVM4DamP |
| 665 | DamX, an inner membrane protein involved in bile | |||
| 3725 | short-chain dehydrogenase | |||
| ??? | R | PinT5IIIP (61% identity) | TCTAGA | PspVM4ORF3726P |
| 3726 | M | M.MspJR02ORF11150P (51% identity) | TCTAGA | M.PspVM4ORF3726P |
| 3727 | 39 aa hypothetical protein | |||
| 2817 | 83 aa hypothetical protein | |||
| 2818 | M | M.PspMSR2DcmP (99% identity) | CCWGG | M.PspVM4DcmP |
| 2819 | V | V.PspMSR2DcmP (99% identity) | V.PspVM4DcmP | |
| 2820 | 91 aa hypothetical protein | |||