Burkholderia pseudomallei NCTC 13178 |
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Putative Burkholderia pseudomallei NCTC 13178 RM systems
Ref: Tuanyok,A. et al. unpublished
REBASE ref # 15966
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,029,451 bp | CP004001 |
| chromosome 2: | 3,361,913 bp | CP004002 |
REBASE acronym: Bps13178
Org_num: 11871
All begin BBJ_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3157 | 757 aa hypothetical protein | |||
| 3158 | M | M.BpsBESORF54P (100% identity) | M.Bps13178ORF3158P | |
| 3159 | S | S.BpsBESORF54P (100% identity) | S.Bps13178ORF3158P | |
| 3160 | R | BpsBESORF54P (100% identity) | Bps13178ORF3158P | |
| 3161 | 250 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1089 | phage virion morphogenesis protein | |||
| 1090 | M | M.Bps5608ORF6241P (99% identity) | M.Bps13178ORF1090P | |
| 1091 | phage baseplate assembly V family protein | |||
| 3166 | baseplate J-like family protein | |||
| 3167 | M | M.Bps6522ORF8920P (99% identity) | M.Bps13178ORF3167P | |
| 3168 | TENA/THI-4/PQQC family protein | |||
| chromosome 2 | ||||
| 5071 | SCO1/SenC family protein | |||
| 5072 | M | M.BpsBDTORF2273P (99% identity) | M.Bps13178ORF5072P | |
| 5073 | bacteriophage lysis family protein | |||
| 5108 | phosphoadenosine phosphosulfate reductase family | |||
| 5109 | M | M.Bps7334ORF6066P (99% identity) | CCCGGG | M.Bps13178ORF5109P |
| 5110 | C-5 cytosine-specific DNA methylase family | |||
| 5109 | DNA methylase family protein | |||
| 5110 | M | M2.Bpa23831ORF20450P (99% identity) | M.Bps13178ORF5110P | |
| 5111 | phage regulatory CII family protein | |||
| 5489 | phosphoadenosine phosphosulfate reductase family | |||
| ??? | M | M.BpsPhi1ORFAP (100% identity) | CCCGGG | M.Bps13178ORF5490P |
| 5491 | 289 aa hypothetical protein | |||
| 5512 | 67 aa hypothetical protein | |||
| 5513 | M | M.Bps4375ORF5696P (99% identity) | M.Bps13178ORF5513P | |
| 5514 | gp43 | |||
| 5572 | tryptophan synthase, alpha subunit | |||
| 5573 | M | M.BspBGKORF4324P (100% identity) | GTWWAC | M.Bps13178ORF5573P |
| 5574 | tryptophan synthase, beta subunit | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2773 | gram-negative porin family protein | |||
| 2774 | R | BpsBEGORF4502P (100% identity) | CACAG | Bps13178ORF2775P |
| ??? | M | M.BpssB03ORFDP (100% identity) | CACAG | M.Bps13178ORF2775P |
| 2776 | gram-negative porin family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3161 | 250 aa hypothetical protein | |||
| 3162 | R | BpsBDMMcrBP (100% identity) | Bps13178McrBP | |
| 3163 | R | BpsBDMMcrCP (100% identity) | Bps13178McrCP | |
| 3164 | calcineurin-like phosphoesterase family protein | |||