Saccharopolyspora erythraea D |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Saccharopolyspora erythraea D RM systems
Ref: Liu,W.B. et al. Genome Announc 1 (5), e00718-13 (2013)
REBASE ref # 16664
Contig set: 7,969,918 bp
GenBank #: AVCN00000000 (NZ_AVCN00000000)
REBASE acronym: SerD
Org_num: 11557
All begin N599_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11260 | serine/threonine protein kinase | |||
| 11265 | R | SerORF871P (100% identity) | SerDORF11275P | |
| ??? | S | S.SerORF871P (100% identity) | S.SerDORF11275P | |
| ??? | M | M2.SerORF871P (100% identity) | M.SerDORF11275P | |
| ??? | type I restriction system adenine methylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21475 | 1273 aa hypothetical protein | |||
| 21480 | RM | SerORF5130P (100% identity) | SerDORF21480P | |
| 21485 | serine/threonine protein kinase | |||
| 13735 | DNA mismatch repair protein Vsr | |||
| ??? | M | M.SerORF1557P (100% identity) | GCCGGC | M.SerDORF13740P |
| 13750 | 283 aa hypothetical protein | |||
| ??? | restriction endonuclease subunit M | |||
| ??? | M | M1.SerORF871P (100% identity) | M.SerDORF11280P | |
| 11285 | 551 aa hypothetical protein | |||
| 8005 | 314 aa hypothetical protein | |||
| 8010 | M | M.SerORF1123P (100% identity) | M.SerDORF8010P | |
| 8015 | DNA repair protein RadA | |||
| 9295 | protein phosphatase | |||
| 9300 | M | M.SerORF6614P (100% identity) | M.SerDORF9300P | |
| 9305 | protein kinase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13810 | 1364 aa hypothetical protein | |||
| 13815 | R | M.Ssp423ORF10940P (18% identity) | SerDMcrCP | |
| 13820 | hypothetical protein | |||