Sphingobium species HDIP04 |
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Putative Sphingobium species HDIP04 RM systems
Ref: Mukherjee,U. et al. Genome Announc 1 (5), e00749-13 (2013)
REBASE ref # 16658
Contig set: 4,741,576 bp
GenBank #: ATDO00000000 (NZ_ATDO00000000)
REBASE acronym: SspPO4
Org_num: 11519
All begin L286_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3470 | 155 aa hypothetical protein | |||
| 3475 | M | M.SluF2ORF19275P (83% identity) | M.SspPO4ORF3475P | |
| 3480 | S | S.SluF2ORF19275P (100% identity) | S.SspPO4ORF3475P | |
| 3485 | R | SluF2ORF19275P (98% identity) | SspPO4ORF3475P | |
| 3490 | 335 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2315 | 54 aa hypothetical protein | |||
| 2320 | M | M.SyaA3ORF33050P (86% identity) | M.SspPO4ORF2320P | |
| 6770 | dihydropteroate synthase | |||
| 6775 | M | M.SspBHCAORFCP (98% identity) | GANTC | M.SspPO4ORF6775P |
| 6780 | 29 aa hypothetical protein | |||
| 17555 | ATPase AAA | |||
| ??? | M | M.SchIP26ORF17970P (100% identity) | M.SspPO4ORF17560P | |
| 17565 | ATPase | |||
| 22465 | 35 aa hypothetical protein | |||
| 22470 | M | M.SspTA15ORF23930P (21% identity) | TCTAGA | M.SspPO4ORF22470P |
| 22475 | integrase | |||
| 9455 | 236 aa hypothetical protein | |||
| 9460 | M | M.SluF2ORF9250P (100% identity) | M.SspPO4ORF9460P | |
| 9465 | integrase | |||
| 23495 | 215 aa hypothetical protein | |||
| 23500 | M | M1.SinMC4ORF2140P (59% identity) | M.SspPO4ORF23500P | |
| 23505 | 79 aa hypothetical protein | |||
| 23550 | 74 aa hypothetical protein | |||
| 23555 | M | M.SxeQYYORFDP (56% identity) | M.SspPO4ORF23555P | |
| 23560 | 164 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16935 | 89 aa hypothetical protein | |||
| 16940 | R | QspZ21ORF8115P (96% identity) | SspPO4ORF16945P | |
| 16945 | M | M.QspZ21ORF8115P (67% identity) | M.SspPO4ORF16945P | |
| 16950 | 951 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3485 | type I deoxyribonuclease HsdR | |||
| 3490 | R | SluF2MrrP (100% identity) | SspPO4MrrP | |
| 3495 | 71 aa hypothetical protein | |||