Burkholderia pseudomallei NCTC 13179 |
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Putative Burkholderia pseudomallei NCTC 13179 RM systems
Ref: Tuanyok,A. et al. unpublished
REBASE ref # 15966
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,997,089 bp | CP003976 |
| chromosome 2: | 3,340,068 bp | CP003977 |
REBASE acronym: Bps13179
Org_num: 11402
All begin BBK_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1782 | type IV secretion-system coupling DNA-binding | |||
| 1783 | M | M.Bps13177ORFCP (100% identity) | M.Bps13179ORF1783P | |
| 1784 | S | S.Bps13177ORFCP (100% identity) | S.Bps13179ORF1783P | |
| 1785 | R | Bps13177ORFCP (100% identity) | Bps13179ORF1783P | |
| 1786 | 250 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1598 | 337 aa hypothetical protein | |||
| ??? | M | M.BpsR456ORF741P (100% identity) | RGATCY | M.Bps13179ORF1600P |
| 1599 | R | R2.BpsR456ORF741P (100% identity) | Bps13179ORF1600P | |
| 1601 | 376 aa hypothetical protein | |||
| 1601 | 376 aa hypothetical protein | |||
| 1602 | R | R1.BpsR456ORF741P (100% identity) | GATC | Bps13179ORF1602P |
| 1603 | amino acid permease family protein | |||
| 1792 | phage tail protein I | |||
| 1793 | M | DNA methylase family protein | M.Bps13179ORF1793P | |
| 1794 | TENA/THI-4/PQQC family protein | |||
| chromosome 2 | ||||
| 4414 | trpA: tryptophan synthase, alpha subunit | |||
| 4415 | M | M.BspBGKORF4324P (100% identity) | GTWWAC | M.Bps13179ORF4415P |
| 4416 | trpB: tryptophan synthase, beta subunit | |||
| 6037 | phage baseplate assembly V family protein | |||
| 6038 | M | M.BpsBEDORF6308P (95% identity) | M.Bps13179ORF6038P | |
| 6039 | 408 aa hypothetical protein | |||
| 6066 | bacteriophage replication A family protein | |||
| ??? | M | M.Bps13177ORFEP (100% identity) | M.Bps13179ORF6067P | |
| 6068 | 79 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1388 | gram-negative porin family protein | |||
| 1389 | R | BpsB03Yap7ORF18360P (100% identity) | CACAG | Bps13179ORF1390P |
| ??? | M | M.BpssB03ORFDP (100% identity) | CACAG | M.Bps13179ORF1390P |
| 1391 | transposase DDE domain protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1786 | 250 aa hypothetical protein | |||
| 1787 | R | Bps13177McrBP (100% identity) | Bps13179McrBP | |
| ??? | R | Bps13177McrCP (100% identity) | Bps13179McrCP | |
| 1789 | calcineurin-like phosphoesterase family protein | |||