Pseudomonas stutzeri B1SMN1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas stutzeri B1SMN1 RM systems
Ref: Busquets,A. et al. Genome Announc 1 (4), e00584-13 (2013)
REBASE ref # 16437
Contig set: 5,318,847 bp
GenBank #: AMVM00000000 (NZ_AMVM00000000)
REBASE acronym: PstMN1
Org_num: 11196
All begin B382_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22455 | 281 aa hypothetical protein | |||
| 22460 | M | M.PmeTTORFDP (93% identity) | M.PstMN1ORF22460P | |
| 22465 | S | S.PspLH1G9ORFDP (52% identity) | S.PstMN1ORF22460P | |
| 22470 | 172 aa hypothetical protein | |||
| 22475 | 957 aa hypothetical protein | |||
| 22480 | McrBC 5-methylcytosine restriction system | |||
| 22485 | 329 aa hypothetical protein | |||
| 22490 | R | Pbe61ORF11465P (98% identity) | PstMN1ORF22460P | |
| 22495 | helicase | |||
| 13279 | 215 aa hypothetical protein | |||
| 13284 | R | Pst442ORF7105P (100% identity) | PstMN1ORF13294P | |
| 13289 | 430 aa hypothetical protein | |||
| 13294 | M | M.SstH46ORFDP (100% identity) | M.PstMN1ORF13294P | |
| 13299 | death-on-curing family protein | |||
| 13304 | S | S.Pst4166ORF1489P (100% identity) | S.PstMN1ORF13294P | |
| 13309 | 361 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14388 | 182 aa hypothetical protein | |||
| 14393 | M | M.PaeH15ORFGP (97% identity) | CCNGG | M.PstMN1ORF14393P |
| 14398 | 97 aa hypothetical protein | |||
| 23643 | 64 aa hypothetical protein | |||
| 23648 | M | M.PfuZS1ORF16715P (84% identity) | M.PstMN1ORF23648P | |
| 23653 | 68 aa hypothetical protein | |||
| 19945 | 218 aa hypothetical protein | |||
| 19950 | M | M.Psp1154ORF22165P (85% identity) | M.PstMN1ORF19950P | |
| 19955 | 206 aa hypothetical protein | |||
| 18393 | PglZ domain-containing protein | |||
| 18398 | RM | Bpa5ORFAP (24% identity) | PstMN1ORF18398BP | |
| 18403 | 700 aa hypothetical protein | |||
| 18408 | 454 aa hypothetical protein | |||
| 18413 | 174 aa hypothetical protein | |||
| 18418 | 380 aa hypothetical protein | |||
| 18423 | RM | Pst29243ORF6315P (100% identity) | PstMN1ORF18398AP | |
| 18428 | 1188 aa hypothetical protein | |||
| 22535 | 90 aa hypothetical protein | |||
| 22540 | M | M.PstYH1ORF16760P (80% identity) | M.PstMN1ORF22540P | |
| 22545 | 367 aa hypothetical protein | |||
| 13284 | type I restriction-modification system, R | |||
| 13289 | R | SstH46ORFEP (99% identity) | PstMN1ORF13289P | |
| 13294 | type I restriction-modification system, M | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25625 | M | adenine specific DNA methylase | M.PstMN1ORF25625P | |
| 25630 | R | PstST9ORF17440P (100% identity) | PstMN1ORF25625P | |
| 25816 | M | M.Psy2190ORF4756P (71% identity) | M.PstMN1ORF25816P | |
| 9407 | 96 aa hypothetical protein | |||
| 9412 | R | PspK35ORF12815P (99% identity) | PstMN1ORF9422P | |
| 9417 | ATP-dependent DNA helicase | |||
| 9422 | M | M.Ftu10ORF891P (35% identity) | M.PstMN1ORF9422P | |
| 9427 | 254 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22470 | 172 aa hypothetical protein | |||
| 22475 | R | Pbe61McrBP (96% identity) | PstMN1McrBP | |
| 22480 | R | Pbe61McrCP (95% identity) | PstMN1McrCP | |
| 22485 | 329 aa hypothetical protein | |||
| 18848 | 147 aa hypothetical protein | |||
| 18853 | R | SstB010MrrP (100% identity) | PstMN1MrrP | |
| 18858 | LysR family transcriptional regulator | |||