Cyclobacterium qasimii M12-11B |
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Putative Cyclobacterium qasimii M12-11B RM systems
Ref: Shivaji,S. et al. Genome Announc 1 (4), e00642-13 (2013)
REBASE ref # 16401
GenBank #: ATNM00000000
REBASE acronym: Cqa11B
Org_num: 11238
All begin ADICYQ_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5354 | 242 aa hypothetical protein | |||
| 5355 | R | AspTRM9ORF6010P (90% identity) | Cqa11BORF5360P | |
| 5356 | 217 aa hypothetical protein | |||
| 5357 | 202 aa hypothetical protein | |||
| 5358 | KAP P-loop domain protein | |||
| 5359 | S | S.Vpa76ORF3005P (31% identity) | S.Cqa11BORF5360P | |
| 5360 | M | M.AspTRM9ORF6010P (66% identity) | M.Cqa11BORF5360P | |
| 5361 | 44 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1490 | 410 aa hypothetical protein | |||
| 1491 | RM | Msps24ORF18580P (16% identity) | Cqa11BORF1491P | |
| 1492 | 60 aa hypothetical protein | |||
| 1793 | 286 aa hypothetical protein | |||
| 1794 | M | M.Gsp7428ORF137P (55% identity) | CCWGG | M.Cqa11BORF1794P |
| 1795 | Manganese transport protein MntH | |||
| 1932 | 37 aa hypothetical protein | |||
| 1933 | M | M.PspCJ43ORF10680P (76% identity) | M.Cqa11BORF1933P | |
| 1934 | RM | PspCJ43ORF10680P (67% identity) | Cqa11BORF1933P | |
| 1935 | 163 aa hypothetical protein | |||
| 1492 | 60 aa hypothetical protein | |||
| 1493 | RM | CpiORF583P (47% identity) | Cqa11BORF1493P | |
| 1494 | 105 aa hypothetical protein | |||
| 5397 | 93 aa hypothetical protein | |||
| 5398 | M | M1.Fsp2013ORFBP (56% identity) | M1.Cqa11BORF5398P | |
| 5399 | M | M1.Fsp34774ORFDP (59% identity) | M2.Cqa11BORF5398P | |
| 5400 | 128 aa hypothetical protein | |||
| 5404 | Endonuclease | |||
| 5405 | R | Fsp34774ORFDP (24% identity) | Cqa11BORF5405P | |
| 5406 | endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1792 | 392 aa hypothetical protein | |||
| 1793 | R | Msp5McrBP (37% identity) | Cqa11BMcrBP | |
| 1794 | DNA-cytosine methyltransferase | |||
| 5110 | 119 aa hypothetical protein | |||
| 5111 | R | AspC21ORF232P (78% identity) | Cqa11BORF5111P | |
| 5112 | DNA-binding response regulator | |||