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Putative Campylobacter jejuni RM systems
Ref: Alfredson,D.A. and Korolik,V. Plasmid 50 (2), 152-160 (2003)
REBASE ref # 21918
Sequence length: | GenBank #: | |
Chromosome: | 1,442,514 bp | FCEZ00000000 (NZ_FCEZ00000000) |
Chromosome: | 1,615,620 bp | FPEE00000000 (NZ_FPEE00000000) |
REBASE acronym: CjeBf
Org_num: 19332
All begin ORF_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
16 | NADP-dependent alcohol dehydrogenase | |||
17 | R | Cje702ORF8170P (100% identity) | CjeBfORFGP | |
18 | 321 aa hypothetical protein | |||
19 | 706 aa hypothetical protein | |||
20 | S | S1.Cje262ORF40P (100% identity) | S1.CjeBfORFGP | |
23 | S | S2.Cje262ORF40P (100% identity) | S2.CjeBfORFGP | |
Chromosome | ||||
32 | NADP-dependent alcohol dehydrogenase | |||
33 | R | Csp9ORF7895P (100% identity) | GCANNNNNRTTA | Cje11168HORFEP |
35 | Uncharacterized protein | |||
36 | 134 aa hypothetical protein | |||
37 | S | S.Csp9ORF7895P (100% identity) | GCANNNNNRTTA | S.Cje11168HORFEP |
40 | 84 aa hypothetical protein | |||
41 | Uncharacterized protein | |||
42 | 102 aa hypothetical protein | |||
43 | M | M1.Csp93259ORF7950P (100% identity) | GCANNNNNRTTA | M.Cje11168HORFEP |
45 | DNA methyltransferase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1 | 73 aa hypothetical protein | |||
2 | R | CjeR73ORF8285P (100% identity) | CATG | CjeBfORFAP |
5 | M | M2.CjeR73ORF8285P (100% identity) | CATG | M.CjeBfORFAP |
6 | 7-cyano-7-deazaguanine reductase | |||
6 | bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase | |||
7 | R | CjeJ026ORF18570P (100% identity) | GANTC | CjeBfORFHP |
8 | M | M.Cje702ORF8400P (100% identity) | GANTC | M.CjeBfORFHP |
9 | 72 aa hypothetical protein | |||
10 | oxidoreductase | |||
11 | M | M1.CjeR73ORF8285P (100% identity) | CATG | M.CjeBfORFIP |
12 | 353 aa hypothetical protein | |||
21 | acetate kinase | |||
22 | RM | Cje702ORF3305P (100% identity) | CjeBfORFEP | |
23 | membrane protein | |||
25 | carbamoyl phosphate synthase large subunit | |||
26 | M | M.CjeJ026ORF2730P (99% identity) | GTAC | M.CjeBfORFDP |
27 | R | CjeJ026ORF2730P (100% identity) | GTAC | CjeBfORFDP |
29 | 140 aa hypothetical protein | |||
46 | thiamine biosynthesis protein ThiH | |||
47 | R | CjeJ026ORF12910P (100% identity) | GCGC | CjeBfORFFP |
48 | M | M.CjeJ026ORF12910P (96% identity) | GCGC | M.CjeBfORFFP |
49 | thiazole synthase | |||
56 | translation initiation factor IF-3 | |||
58 | M | M.Csp6462ORF320P (77% identity) | RAATTY | M.CjeBfORFBP |
59 | energry transducer TonB | |||
Chromosome | ||||
1 | Uncharacterized protein | |||
3 | RM | CjemfKORF180P (69% identity) | Cje11168HORFAAP | |
4 | RM | CjeJ047ORF310BP (100% identity) | Cje11168HORFABP | |
5 | uncharacterized protein | |||
5 | Acetate kinase | |||
6 | RM | CjemfKORF3435P (100% identity) | GKAAYG | Cje11168HORFCP |
7 | Uncharacterized protein | |||
11 | Translation initiation factor IF-3 | |||
??? | M | M.Csp93259ORF1035P (100% identity) | RAATTY | M.Cje11168HORFBP |
14 | 138 aa hypothetical protein | |||
21 | NAD-dependent protein deacylase | |||
23 | RM | CjemfKORF5245P (44% identity) | Cje11168HORFDP | |
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
45 | ATPase, partial | |||
46 | M | M.Cje702ORF1385P (100% identity) | M.CjeBfORFCP | |
47 | R | Cje702ORF1385P (98% identity) | CjeBfORFCP | |
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
22 | ribosome maturation factor | |||
24 | R | Cje702McrBP (100% identity) | CjeBfMcrBP | |
25 | R | Cje702McrCP (100% identity) | CjeBfMcrCP | |
26 | membrane protein | |||
Chromosome | ||||
146 | 112 aa hypothetical protein | |||
147 | R | Csp93257McrBP (100% identity) | Cje11168HMcrBP | |
148 | R | CjemfKMcrCP (100% identity) | Cje11168HMcrCP | |
149 | Membrane protein |