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Putative Salmonella enterica subsp. enterica serovar Heidelberg 41578 RM systems
Ref: Hoffman,M. et al. unpublished
REBASE ref # 16182
Sequence length: | GenBank #: | |
Chromosome: | 4,793,479 bp | CP004086 |
plasmid pSEEH1578_01: | 117,929 bp | CP004087 |
REBASE acronym: Sen318
Org_num: 11266
All begin SEEH1578_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
8670 | endoribonuclease SymE | |||
8675 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen318I |
8680 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen318I |
8685 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen318IP |
8690 | restriction endonuclease | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3025 | global DNA-binding transcriptional dual | |||
3030 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen318III |
3035 | 54 aa hypothetical protein | |||
3495 | ribulose-phosphate 3-epimerase | |||
3500 | M | M.StyTDamP (100% identity) | GATC | M.Sen318DamP |
3505 | cell division protein DamX | |||
8515 | ATP-dependent helicase | |||
8520 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen318ORFEP |
14240 | Bacteriophage protein | |||
14245 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.Sen318IV |
14250 | Integration, recombination (Phage or Prophage) | |||
19220 | DMT superfamily transporter inner membrane | |||
19225 | V | V.StyTDcmP (100% identity) | V.Sen318DcmP | |
19230 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen318DcmP |
19235 | hydrolase | |||
plasmid pSEEH1578_01 | ||||
275 | 73 aa hypothetical protein | |||
280 | M | M.SspPIBORF23080P (100% identity) | M.Sen318ORFHP | |
285 | yfaB | |||
430 | TnpA IS26 (1) | |||
435 | R | Ubap201ORF4P (100% identity) | CCWGG | Sen318ORFGP |
440 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Sen318ORFGP |
445 | insertion element protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
11195 | sialic acid transporter | |||
11200 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen318II |
??? | R | type III restriction enzyme, res subunit family | CAGAG | Sen318IIP |
11215 | 33 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
8685 | type I restriction enzyme EcoKI subunit R | |||
8690 | R | StyUK1MrrP (100% identity) | Sen318MrrP | |
8695 | 95 aa hypothetical protein |