Salmonella enterica subsp. enterica serovar Typhimurium STm10 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium STm10 RM systems
Ref: Hogg,G. et al. Genome Announc 1 (3) (2013)
REBASE ref # 16105
Contig set: 4,897,374 bp
GenBank #: AMEE00000000 (NZ_AMEE00000000)
REBASE acronym: SenSTm10
Org_num: 10785
All begin B578_, ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22205 | endoribonuclease SymE | |||
| 22210 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenSTm10ORF22215P |
| 22215 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.SenSTm10ORF22215P |
| 22220 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenSTm10ORF22215P |
| 22225 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9790 | DMT superfamily transporter inner membrane | |||
| 9795 | V | V.StyUK1DcmP (100% identity) | V.SenSTm10DcmP | |
| 9800 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenSTm10DcmP |
| 9805 | hydrolase | |||
| 22999 | 62 aa hypothetical protein | |||
| 23004 | M | M.StyUK1ORFAP (100% identity) | M.SenSTm10ORF23004P | |
| 23009 | 73 aa hypothetical protein | |||
| 22048 | ABC-type sugar/spermidine/putrescine | |||
| 22053 | RM | SenSTm9ORF21385P (100% identity) | GATCAG | SenSTm10ORF22053P |
| 22058 | DNA repair ATPase | |||
| 16647 | DNA-binding protein Fis | |||
| 16652 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSTm10ORF16652P |
| 166 | 70 aa hypothetical protein | |||
| 167 | M | M.SenSTm9ORF23047P (100% identity) | GATC | M.SenSTm10ORF23839P |
| 169 | DUF2732 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1588 | inner membrane protein | |||
| 1593 | M | M.StyUK1I (100% identity) | CAGAG | M.SenSTm10ORF1593P |
| 1598 | R | StyUK1IP (99% identity) | CAGAG | SenSTm10ORF1593P |
| 1603 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22220 | type I restriction enzyme EcoKI subunit R | |||
| 22225 | R | StyUK1MrrP (100% identity) | SenSTm10MrrP | |
| 22230 | toxin-antitoxin system, toxin component | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10050 | 129 aa hypothetical protein | |||
| 10055 | M | M.StyUK1V (100% identity) | GATC | M.SenSTm10ORF10055P |
| 10060 | phage protein | |||