Salmonella enterica subsp. enterica serovar Typhimurium STm9 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium STm9 RM systems
Ref: Hogg,G. et al. Genome Announc 1 (3) (2013)
REBASE ref # 16105
Contig set: 4,890,559 bp
GenBank #: AMEA00000000 (NZ_AMEA00000000)
REBASE acronym: SenSTm9
Org_num: 10782
All begin B577_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21532 | endoribonuclease SymE | |||
| 21537 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenSTm9ORF21542P |
| 21542 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.SenSTm9ORF21542P |
| 21547 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenSTm9ORF21542P |
| 21552 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23954 | 73 aa hypothetical protein | |||
| 23959 | M | M.StyUK1ORFAP (100% identity) | M.SenSTm9ORF23959P | |
| 23964 | 62 aa hypothetical protein | |||
| 9550 | DMT superfamily transporter inner membrane | |||
| 9555 | V | V.StyUK1DcmP (100% identity) | V.SenSTm9DcmP | |
| 9560 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenSTm9DcmP |
| 9565 | hydrolase | |||
| 21380 | ABC-type sugar/spermidine/putrescine | |||
| 21385 | RM | SenSTm8ORF22587P (100% identity) | GATCAG | SenSTm9ORF21385P |
| 21390 | DNA repair ATPase | |||
| 22683 | DNA-binding protein Fis | |||
| 22688 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSTm9ORF22688P |
| 22693 | 54 aa hypothetical protein | |||
| 23042 | 77 aa hypothetical protein | |||
| 23047 | M | M.SenSTm8ORF24051P (100% identity) | GATC | M.SenSTm9ORF23047P |
| 23052 | 70 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1593 | inner membrane protein | |||
| 1598 | M | M.StyUK1I (100% identity) | CAGAG | M.SenSTm9ORF1598P |
| 1603 | R | StyUK1IP (99% identity) | CAGAG | SenSTm9ORF1598P |
| 1608 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21547 | type I restriction enzyme EcoKI subunit R | |||
| 21552 | R | StyUK1MrrP (100% identity) | SenSTm9MrrP | |
| 21557 | toxin-antitoxin system, toxin component | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9800 | 129 aa hypothetical protein | |||
| 9805 | M | M.StyUK1V (100% identity) | GATC | M.SenSTm9ORF9805P |
| 9810 | phage protein | |||