Salmonella enterica subsp. enterica serovar Typhimurium STm2 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium STm2 RM systems
Ref: Hogg,G. et al. Genome Announc 1 (3) (2013)
REBASE ref # 16105
Contig set: 4,999,102 bp
GenBank #: AMDY00000000 (NZ_AMDY00000000)
REBASE acronym: SenSTm2
Org_num: 10780
All begin B572_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22735 | endoribonuclease SymE | |||
| 22740 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenSTm2ORF22745P |
| 22745 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.SenSTm2ORF22745P |
| 22750 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenSTm2ORF22745P |
| 22755 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10387 | 129 aa hypothetical protein | |||
| ??? | M | bacteriophage protein | GATC | M.SenSTm2ORF10392P |
| 10397 | phage protein | |||
| 24874 | 57 aa hypothetical protein | |||
| 24879 | M | M.StyR64ORFAP (100% identity) | M.SenSTm2ORF24879P | |
| 24884 | 73 aa hypothetical protein | |||
| 10132 | DMT superfamily transporter inner membrane | |||
| 10137 | V | V.StyUK1DcmP (100% identity) | V.SenSTm2DcmP | |
| 10142 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenSTm2DcmP |
| 10147 | hydrolase | |||
| 23379 | 62 aa hypothetical protein | |||
| 23384 | M | M.StyUK1ORFAP (100% identity) | M.SenSTm2ORF23384P | |
| 23389 | 73 aa hypothetical protein | |||
| 22573 | ABC-type sugar/spermidine/putrescine | |||
| 22578 | RM | SenSTm9ORF21385P (100% identity) | GATCAG | SenSTm2ORF22578P |
| 22583 | DNA repair ATPase | |||
| 17042 | DNA-binding protein Fis | |||
| 17047 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSTm2ORF17047P |
| 17052 | 54 aa hypothetical protein | |||
| 24044 | 70 aa hypothetical protein | |||
| 24049 | M | M.SenSTm9ORF23047P (100% identity) | GATC | M.SenSTm2ORF24049P |
| 24054 | 77 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1928 | inner membrane protein | |||
| 1933 | M | M.StyUK1I (100% identity) | CAGAG | M.SenSTm2ORF1933P |
| 1938 | R | StyUK1IP (99% identity) | CAGAG | SenSTm2ORF1933P |
| 1943 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22750 | type I restriction enzyme EcoKI subunit R | |||
| 22755 | R | StyUK1MrrP (100% identity) | SenSTm2MrrP | |
| 22760 | toxin-antitoxin system, toxin component | |||