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Putative Burkholderia cenocepacia K56-2Valvano RM systems
Ref: Brinkac,L.M. et al. unpublished
REBASE ref # 16076
Contig set: 7,750,255 bp
GenBank #: ALJA00000000 (NZ_ALJA00000000)
REBASE acronym: BceK56
Org_num: 10719
All begin BURCENK562V_, BURCENK562V_A, BURCENK562V_C, BURCENK562V_P
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
44 | R | BceK562VORFAP (33% identity) | BceK56ORF44P | |
45 | transposase | |||
2715 | DNA gyrase, B subunit | |||
2716 | R | BceK562VORFAP (90% identity) | BceK56ORF2719P | |
2717 | transposase | |||
8 | M | M.BceK562ORF10443P (100% identity) | M.BceK56ORF8P | |
9 | transposase | |||
10 | R | BceK56ORF44P (51% identity) | BceK56ORF8P | |
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2706 | tryptophan synthase, beta subunit | |||
2707 | M | M.Bcet4ORF24860P (100% identity) | GTWWAC | M.BceK56II |
2708 | tryptophan synthase, alpha subunit | |||
1416 | 848 aa hypothetical protein | |||
??? | M | M.BceK562VORFCP (100% identity) | M.BceK56ORFAP | |
1417 | toxin of toxin-antitoxin type 1 system domain | |||
102 | 153 aa hypothetical protein | |||
103 | M | M.BceK56ORF119P (94% identity) | A | M.BceK56ORF103P |
104 | 168 aa hypothetical protein | |||
50 | 266 aa hypothetical protein | |||
51 | M | M.BceK562VORFDP (100% identity) | GGCC | M.BceK56ORF51P |
52 | 227 aa hypothetical protein | |||
6769 | 848 aa hypothetical protein | |||
??? | M | M.BceK562VORFCP (100% identity) | M.BceK56ORFAP | |
6770 | toxin of toxin-antitoxin type 1 system domain | |||
118 | 168 aa hypothetical protein | |||
119 | M | M.BceK56ORF119P (94% identity) | A | M.BceK56ORF103P |
120 | 153 aa hypothetical protein | |||
3017 | tryptophan synthase, beta subunit | |||
3018 | M | M.Bcet4ORF24860P (100% identity) | GTWWAC | M.BceK56II |
3019 | tryptophan synthase, alpha subunit | |||
3068 | 266 aa hypothetical protein | |||
3069 | M | M.BceK562VORFDP (100% identity) | GGCC | M.BceK56ORF51P |
3070 | 227 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
273 | 48 aa hypothetical protein | |||
274 | R | BspEMB26ORF190P (100% identity) | CACAG | BceK56IP |
275 | M | M.BspEMB26ORF190P (99% identity) | CACAG | M.BceK56I |
2198 | 39 aa hypothetical protein | |||
2199 | M | M.BspEMB26ORF190P (99% identity) | CACAG | M.BceK56I |
2200 | R | BspEMB26ORF190P (100% identity) | CACAG | BceK56IP |
2201 | 127 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
3065 | MFS transporter, metabolite:H+ symporter (MHS) | |||
??? | R | BceK562VMcrAP (100% identity) | BceK56McrAP | |
3067 | UDP-N-acetylglucosamine | |||
3596 | UDP-N-acetylglucosamine | |||
3597 | R | BceK562VMcrAP (100% identity) | BceK56McrAP | |
3598 | MFS transporter, metabolite:H+ symporter (MHS) |