Bifidobacterium longum subsp. longum 2-2B |
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Putative Bifidobacterium longum subsp. longum 2-2B RM systems
Ref: Shkoporov,A.N. et al. Genome Announc 1 (3), E00234-13 (2013)
REBASE ref # 16013
Contig set: 2,625,697 bp
GenBank #: AJTJ00000000 (NZ_AJTJ00000000)
REBASE acronym: Blo22B
Org_num: 10689
All begin HMPREF1315_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 302 | methionine adenosyltransferase | |||
| 303 | R | Blo35BORF325P (100% identity) | Blo22BORF306P | |
| 304 | divergent AAA domain protein | |||
| 305 | S | S3.Blo35BORF325P (100% identity) | S1.Blo22BORF306P | |
| 306 | M | M.Blo35BORF325P (100% identity) | M.Blo22BORF306P | |
| 307 | PF14267 domain protein | |||
| 308 | S | S2.Blo35BORF325P (100% identity) | S2.Blo22BORF306P | |
| 309 | site-specific recombinase, phage integrase | |||
| 310 | S | S1.Blo35BORF325P (100% identity) | S3.Blo22BORF306P | |
| 311 | isoleucine--tRNA ligase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2359 | 310 aa hypothetical protein | |||
| 2360 | M | M.Blo10035ORF219P (98% identity) | AAGCTT | M.Blo22BORF2360P |
| 2361 | single-stranded DNA-binding protein | |||
| 1009 | 64 aa hypothetical protein | |||
| 1010 | RM | Blo44BORF1778P (99% identity) | GAGGAC | Blo22BORF1010P |
| 1011 | PF12952 domain protein | |||
| 2224 | transposase, IS605 OrfB family | |||
| 2225 | M | M.Blo35BORF1426P (100% identity) | GATC | M.Blo22BORF2225P |
| 2226 | 285 aa hypothetical protein | |||
| 2434 | bacterial mobilization protein MobC domain | |||
| ??? | R | BloW11ORF1248P (73% identity) | CCWGG | Blo22BORF2436P |
| 2436 | M | M.Bps11027ORF8990P (100% identity) | CCWGG | M.Blo22BORF2436P |
| 2437 | Fic/DOC family protein | |||
| 820 | 60 aa hypothetical protein | |||
| 821 | M | M.Blo10002ORF720P (91% identity) | M.Blo22BORF821P | |
| 822 | methyltransferase domain protein | |||
| 821 | DNA (cytosine-5-)-methyltransferase | |||
| 822 | RM | Bbr7017ORF142BP (39% identity) | GAGGAC | Blo22BORF822P |
| 823 | plasmid encoded RepA protein | |||