Bifidobacterium longum subsp. longum 44B |
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Putative Bifidobacterium longum subsp. longum 44B RM systems
Ref: Shkoporov,A.N. et al. Genome Announc 1 (3), E00234-13 (2013)
REBASE ref # 16013
Contig set: 2,559,217 bp
GenBank #: AJTM00000000 (NZ_AJTM00000000)
REBASE acronym: Blo44B
Org_num: 10667
All begin HMPREF1312_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.UbaF34CY14ORFAP (73% identity) | S.Blo44BORFAP | |
| 2304 | restriction endonuclease | |||
| 2305 | M | M.BloK5ORF7835P (100% identity) | M.Blo44BORF2305P | |
| 2306 | S | 53 aa hypothetical protein | S.Blo44BORF2305P | |
| 1919 | methionine adenosyltransferase | |||
| 1920 | R | BloK5ORF7835P (99% identity) | Blo44BORF1920P | |
| 1921 | divergent AAA domain protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2158 | 60 aa hypothetical protein | |||
| 2159 | M | M.Blo16BORF2169P (100% identity) | M.Blo44BORF2159P | |
| 2160 | plasmid encoded RepA protein | |||
| 1777 | PF12952 domain protein | |||
| 1778 | RM | Blo16BORF1413P (100% identity) | GAGGAC | Blo44BORF1778P |
| 1779 | 40 aa hypothetical protein | |||
| 787 | single-stranded DNA-binding protein | |||
| 788 | M | M.Blo16BORF1399P (100% identity) | AAGCTT | M.Blo44BORF788P |
| 789 | 229 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2303 | site-specific recombinase, phage integrase | |||
| 2304 | R | BloNMrrP (100% identity) | Blo44BMrrP | |
| 2305 | type I restriction-modification system, M | |||