Bacteroides finegoldii DSM 17565 |
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Putative Bacteroides finegoldii DSM 17565 RM systems
Ref: Fulton,L. et al. unpublished
REBASE ref # 11238
| Sequence length: | GenBank #: | |
| Chromosome: | 4,881,901 bp | ABXI00000000 (NZ_ABXI00000000) |
| Chromosome: | 4,921,693 bp | AP027244 |
REBASE acronym: Bfi17565
Org_num: 8122
All begin BACFIN_, BFINE_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5010 | 401 aa hypothetical protein | |||
| 5011 | R | Bfi13345ORF29740P (100% identity) | Bfi17565ORF5015P | |
| 5012 | S | S2.Bfr9ORF8820P (100% identity) | S1.Bfi17565ORF5015P | |
| 5013 | phage integrase SAM-like domain protein | |||
| 5014 | S | S1.Bfr9ORF8820P (100% identity) | S2.Bfi17565ORF5015P | |
| 5015 | M | M2.BspM10CORF13170P (100% identity) | M2.Bfi17565ORF5015P | |
| 5016 | M | M1.BspM10CORF13170P (99% identity) | M1.Bfi17565ORF5015P | |
| 5017 | 460 aa hypothetical protein | |||
| Chromosome | ||||
| 12740 | 146 aa hypothetical protein | |||
| 12750 | S | S.PmeBin26ORFBP (64% identity) | S.Bfi13345ORF12760P | |
| 12760 | M | M.PmeBin26ORFBP (99% identity) | M.Bfi13345ORF12760P | |
| 12770 | 140 aa hypothetical protein | |||
| 27560 | transcriptional regulator | |||
| ??? | R | BovC20ORF4878P (100% identity) | Bfi13345ORF27590P | |
| 27590 | M | M.BovH2495ORF22990P (99% identity) | M.Bfi13345ORF27590P | |
| 27600 | S | S1.Bxy514ORF13810P (16% identity) | S1.Bfi13345ORF27590P | |
| 27610 | S | S1.Bth478ORF12570P (9% identity) | S2.Bfi13345ORF27590P | |
| 27620 | S | S2.Bth576ORF7160P (22% identity) | S3.Bfi13345ORF27590P | |
| 27630 | S | S1.PmeBin26ORFCP (27% identity) | S4.Bfi13345ORF27590P | |
| 27640 | integrase | |||
| 27650 | 307 aa hypothetical protein | |||
| 27660 | 261 aa hypothetical protein | |||
| 27670 | 189 aa hypothetical protein | |||
| 27680 | 77 aa hypothetical protein | |||
| 27690 | S | S4.PmeBin7ORFBP (99% identity) | S5.Bfi13345ORF27590P | |
| 27700 | DNA helicase | |||
| 29730 | 269 aa hypothetical protein | |||
| ??? | M | M1.Bfi17565ORF5015P (98% identity) | M1.Bfi13345ORF29740P | |
| 29760 | M | M2.BspM10CORF13170P (100% identity) | M2.Bfi13345ORF29740P | |
| 29770 | S | S1.Bfr9ORF8820P (100% identity) | S1.Bfi13345ORF29740P | |
| 29780 | phage integrase | |||
| 29790 | S | S2.Bfr9ORF8820P (100% identity) | S2.Bfi13345ORF29740P | |
| 29800 | R | Bfi17565ORF5015P (100% identity) | Bfi13345ORF29740P | |
| 29810 | 401 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8762 | type II restriction enzyme NgoMIV | |||
| 8763 | M | M.Bfi13345ORF13120P (96% identity) | GCCGGC | M.Bfi17565ORF8763P |
| 8764 | oxaloacetate decarboxylase | |||
| 5912 | 677 aa conserved hypothetical protein | |||
| 5913 | M | M.Fnu048ORFGP (100% identity) | M.Bfi17565ORF5913P | |
| 5914 | thymidylate synthase | |||
| 6304 | thymidylate synthase | |||
| 6305 | M | M.Pvu1ORF10945P (100% identity) | M.Bfi17565ORF6305P | |
| 6306 | 39 aa hypothetical protein | |||
| Chromosome | ||||
| 9460 | 199 aa hypothetical protein | |||
| ??? | M | M.Bfa493ORF17070P (88% identity) | M.Bfi13345ORF9470P | |
| 9490 | conjugative transposon protein TraM | |||
| 9690 | 102 aa hypothetical protein | |||
| ??? | M | M.Bun13288ORFLP (75% identity) | M.Bfi13345ORFAP | |
| 9700 | 241 aa hypothetical protein | |||
| 13110 | pyruvate carboxylase subunit B | |||
| 13120 | M | M.Bfi17565ORF8763P (96% identity) | M.Bfi13345ORF13120P | |
| 13130 | R | Bsp5287ORFAP (98% identity) | Bfi13345ORF13120P | |
| 13140 | DDE transposase | |||
| 15960 | 367 aa hypothetical protein | |||
| 15970 | V | V.Pdi113806ORF8250P (100% identity) | V.Bfi13345ORF16000P | |
| 15980 | 512 aa hypothetical protein | |||
| 15990 | R | Bsp3716PORF19155P (100% identity) | Bfi13345ORF16000P | |
| 16000 | M | M.Pdi113806ORF8250P (100% identity) | M.Bfi13345ORF16000P | |
| 16010 | C | C.Bfr1ORF23065P (100% identity) | C.Bfi13345ORF16000P | |
| 16020 | 79 aa hypothetical protein | |||
| 21750 | 78 aa hypothetical protein | |||
| ??? | M | M.PjeF0106II (96% identity) | M.Bfi13345ORF21760P | |
| 21790 | 71 aa hypothetical protein | |||
| 21800 | S | S.PjeF0106II (61% identity) | S.Bfi13345ORF21760P | |
| 21810 | 80 aa hypothetical protein | |||
| 22370 | DNA primase | |||
| ??? | M | M.PmeBin28ORFCP (100% identity) | GATC | M.Bfi13345ORF22380P |
| 22400 | 74 aa hypothetical protein | |||
| 23540 | 99 aa hypothetical protein | |||
| 23550 | M | M.Fnu048ORFGP (53% identity) | M.Bfi13345ORF23550AP | |
| 23560 | M | M.Uph2207ORFAP (34% identity) | M.Bfi13345ORF23550BP | |
| 23570 | 698 aa hypothetical protein | |||
| 34500 | 320 aa hypothetical protein | |||
| ??? | RM | Msa17ORFEP (95% identity) | Bfi13345ORF34510P | |
| 34540 | 102 aa hypothetical protein | |||
| 40730 | conjugal transfer protein | |||
| 40740 | M | M.Pvu1099ORF17590P (21% identity) | M.Bfi13345ORF40740BP | |
| ??? | M | M.PdiF128ORF18835P (73% identity) | M.Bfi13345ORF40740AP | |
| 40750 | 123 aa hypothetical protein | |||