Escherichia coli FDA517 |
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Putative Escherichia coli FDA517 RM systems
Ref: Eppinger,M. et al. Genome Announc 1 (2), E0013412 (2013)
REBASE ref # 15767
Contig set: 5,524,829 bp
GenBank #: AKKX00000000 (NZ_AKKX00000000)
REBASE acronym: Eco517
Org_num: 10402
All begin ECFDA517_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 27 | endoribonuclease symE | |||
| 28 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco517ORF29P |
| 29 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco517ORF29P |
| 30 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco517ORF29P |
| 31 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3197 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco517ORF3197P |
| 3198 | ninB protein | |||
| 2106 | 65 aa hypothetical protein | |||
| 2107 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco517ORF2107P | |
| 5928 | 41 aa hypothetical protein | |||
| 5929 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco517ORF5929P | |
| 5930 | 73 aa hypothetical protein | |||
| 5899 | ATP-dependent helicase | |||
| 5900 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco517ORF5900P |
| 415 | 162 aa hypothetical protein | |||
| 416 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco517ORF416P |
| 417 | lexA DNA binding domain protein | |||
| 4819 | ribulose-phosphate 3-epimerase | |||
| 4820 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco517DamP |
| 4821 | protein damX | |||
| 3062 | 306 aa hypothetical protein | |||
| 3063 | V | V.EcosPA8DcmP (100% identity) | V.Eco517DcmP | |
| 3064 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco517DcmP |
| 3065 | 231 aa hypothetical protein | |||
| 5629 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco517ORF5630P | |
| 5632 | 116 aa hypothetical protein | |||
| 4714 | DNA-binding protein fis | |||
| 4715 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco517ORF4715P |
| 4716 | 59 aa hypothetical protein | |||
| 3891 | transcriptional activator | |||
| 3892 | M | M.EcoTT12BORF19880P (100% identity) | GATC | M.Eco517ORF3892P |
| 3893 | 64 aa hypothetical protein | |||