Escherichia coli EC4013 |
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Putative Escherichia coli EC4013 RM systems
Ref: Eppinger,M. et al. Genome Announc 1 (2), E0013412 (2013)
REBASE ref # 15767
Contig set: 5,352,094 bp
GenBank #: AKMH00000000 (NZ_AKMH00000000)
REBASE acronym: Eco4013
Org_num: 10411
All begin ECEC4013_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 134 | endoribonuclease symE | |||
| 135 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco4013ORF136P |
| 136 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco4013ORF136P |
| 137 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco4013ORF136P |
| 138 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3128 | M | M.SflN97ORF15810P (94% identity) | GATC | M.Eco4013ORF3128P |
| 3129 | ninB protein | |||
| 3642 | M | phage N-6-adenine-methyltransferase | GATC | M.Eco4013ORF3642P |
| 3643 | 39 aa hypothetical protein | |||
| 2071 | 76 aa hypothetical protein | |||
| 2072 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco4013ORF2072P | |
| 2075 | 52 aa hypothetical protein | |||
| 2149 | 76 aa hypothetical protein | |||
| 2150 | M | M.EcoTWORF1742P (100% identity) | M.Eco4013ORF2150P | |
| 3664 | 55 aa hypothetical protein | |||
| 3665 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco4013ORF3665P |
| 3666 | 70 aa hypothetical protein | |||
| 5730 | 41 aa hypothetical protein | |||
| ??? | M | M.EcosPA8ORF27775P (100% identity) | M.Eco4013ORF5731P | |
| 5732 | 73 aa hypothetical protein | |||
| 3015 | 306 aa hypothetical protein | |||
| ??? | V | V.EcosPA8DcmP (100% identity) | V.Eco4013DcmP | |
| 3017 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco4013DcmP |
| 3018 | 231 aa hypothetical protein | |||
| 4696 | ribulose-phosphate 3-epimerase | |||
| 4697 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4013DamP |
| 4698 | protein damX | |||
| 5542 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco4013ORF5543P | |
| 5545 | 116 aa hypothetical protein | |||
| 82 | ATP-dependent helicase | |||
| 83 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco4013ORF83P |
| 4590 | DNA-binding protein fis | |||
| 4591 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco4013ORF4591P |
| 4592 | 37 aa hypothetical protein | |||