Cupriavidus species HMR-1 |
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Putative Cupriavidus species HMR-1 RM systems
Ref: Li,L.G. et al. Genome Announc 1 (1), E00202-E00212 (2013)
REBASE ref # 15597
Contig set: 6,642,382 bp
GenBank #: ANKP00000000 (NZ_ANKP00000000)
REBASE acronym: CspHMR1
Org_num: 10337
All begin D769_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15460 | R | CpiHN2ORF12465P (38% identity) | CCWGG | CspHMR1ORF15460P |
| 15465 | 966 aa hypothetical protein | |||
| 19233 | R | CpiHN2ORF12465P (48% identity) | CCWGG | CspHMR1ORF19243P |
| 19238 | V | V.CpiHN2ORF12465P (84% identity) | V.CspHMR1ORF19243P | |
| 19243 | M | M.CpiHN2ORF12465P (96% identity) | CCWGG | M.CspHMR1ORF19243P |
| 19248 | type II restriction endonuclease | |||
| 19243 | DNA-cytosine methyltransferase | |||
| 19248 | R | BspTHE68ORF71100P (59% identity) | CCWGG | CspHMR1ORF19248P |
| 19253 | 1009 aa hypothetical protein | |||
| 19959 | 81 aa hypothetical protein | |||
| 19964 | M | M.CspEM10ORF31065P (64% identity) | M.CspHMR1ORF19964P | |
| 16652 | ATPase-like protein | |||
| 16657 | M | M.RpsRSORF4125P (85% identity) | CTGCAG | M.CspHMR1ORF16657P |
| 16662 | 851 aa hypothetical protein | |||
| 19522 | tryptophan synthase subunit alpha | |||
| 19527 | M | M.CmeNE12ORFIP (87% identity) | M.CspHMR1ORF19527P | |
| 19532 | tryptophan synthase subunit beta | |||
| 3410 | UvrD/REP helicase | |||
| 3415 | RM | Bgl15SORF14700P (98% identity) | CspHMR1ORF3415P | |
| 3420 | 111 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17112 | abortive phage infection protein | |||
| 17117 | M | M.Bbr211ORF902P (92% identity) | M.CspHMR1ORF17117P | |
| 17122 | R | MspSC29ORF12100P (98% identity) | CspHMR1ORF17117P | |
| 17127 | ATPase AAA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17122 | type III restriction protein res subunit | |||
| 17127 | R | MspSC29McrBP (97% identity) | CspHMR1McrBP | |
| 17132 | Dps family ferritin | |||
| 24338 | 419 aa hypothetical protein | |||
| 24343 | R | MspSC29McrCP (51% identity) | CspHMR1McrC2P | |
| 24348 | TnpA transposase | |||