Streptomyces hygroscopicus subsp. jinggangensis TL01 |
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Putative Streptomyces hygroscopicus subsp. jinggangensis TL01 RM systems
Ref: Wu,H. and Bai,L. unpublished
REBASE ref # 14208
| Sequence length: | GenBank #: | |
| Chromosome: | 9,840,102 bp | CP003720 |
| plasmid pSHJGH2: | 73,285 bp | CP003722 |
REBASE acronym: ShyTL1
Org_num: 10129
All begin SHJGH_, SHJGH_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4677 | 222 aa hypothetical protein | |||
| 4678 | M | M.Shy1717ORF3515P (98% identity) | M.ShyTL1ORF4678P | |
| 4679 | S | S.Shy1717ORF3515P (98% identity) | S.ShyTL1ORF4678P | |
| 4680 | iron uptake regulatory protein | |||
| 5927 | ATP-binding protein | |||
| 5928 | R | Shy5008ORF6168P (100% identity) | ShyTL1ORF5930P | |
| 5929 | S | 37 aa hypothetical protein | S.ShyTL1ORF5930P | |
| 5930 | M | M.Shy5008ORF6168P (100% identity) | M.ShyTL1ORF5930P | |
| 5931 | 58 aa hypothetical protein | |||
| 7678 | traSA:integrase fusion protein | |||
| 7679 | M | M.Shy5008ORF7917P (100% identity) | M.ShyTL1ORF7679P | |
| ??? | S | S.Shy5008ORF7917P (100% identity) | S.ShyTL1ORF7679P | |
| 7680 | R | Shy5008ORF7917P (100% identity) | ShyTL1ORF7679P | |
| 7681 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4112 | 337 aa hypothetical protein | |||
| ??? | V | V.Shy5008ORFCP (100% identity) | V.ShyTL1ORFEP | |
| 4113 | R | R1.Shy5008ORFCP (100% identity) | GCCGGC | R1.ShyTL1ORFEP |
| ??? | M | M.Shy5008ORFCP (100% identity) | M.ShyTL1ORFEP | |
| ??? | R | R2.Shy5008ORFCP (100% identity) | GCCGGC | R2.ShyTL1ORFEP |
| 4114 | NUDIX hydrolase | |||
| 4336 | integral membrane protein | |||
| 4337 | M | M.Shy5008ORF4575P (100% identity) | M.ShyTL1ORF4337P | |
| 4338 | 233 aa conserved hypothetical cytosolic protein | |||
| 6181 | 170 aa hypothetical protein | |||
| ??? | R | Shy5008ORFAP (100% identity) | GCGGCCGC | ShyTL1ORFBP |
| ??? | M | M.Shy5008ORFAP (100% identity) | GCGGCCGC | M.ShyTL1ORFBP |
| 6182 | 120 aa hypothetical protein | |||
| 7561 | 364 aa hypothetical protein | |||
| 7562 | M | M.Shy5008ORF7800P (100% identity) | M.ShyTL1ORF7562P | |
| 7563 | serine/threonine protein kinase | |||
| 7565 | helicase-like protein | |||
| 7566 | RM | Shy5008ORF7800P (100% identity) | ShyTL1ORF7566P | |
| 7567 | 40 aa hypothetical protein | |||
| 7575 | 132 aa hypothetical protein | |||
| ??? | RM | Shy5008ORF7814P (100% identity) | ShyTL1ORFAP | |
| 7578 | DNA polymerase III beta chain | |||
| 7727 | IS630 family transposase | |||
| 7728 | M | M.Shy5008ORF7966P (100% identity) | M.ShyTL1ORF7728P | |
| 7729 | 290 aa hypothetical protein | |||
| plasmid pSHJGH2 | ||||
| 223 | 146 aa hypothetical protein | |||
| 224 | M | M.Shy5008ORF224P (100% identity) | M.ShyTL1ORF224P | |
| 225 | 155 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5926 | 242 aa hypothetical protein | |||
| ??? | R | Shy5008ORFBP (100% identity) | ShyTL1ORFCP | |
| 5927 | ATP-binding protein | |||