Salmonella enterica subsp. enterica serovar Dublin SL1438 |
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Putative Salmonella enterica subsp. enterica serovar Dublin SL1438 RM systems
Ref: Allard,M. et al. unpublished
REBASE ref # 15468
Contig set: 4,872,091 bp
GenBank #: AHUJ00000000 (NZ_AHUJ00000000)
REBASE acronym: Sen1438
Org_num: 10059
All begin SEEDSL_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | restriction endonuclease | |||
| 22476 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen1438ORF22476P |
| 22491 | R | Ssp3CORF11555P (100% identity) | Sen1438ORF22476P | |
| 22496 | 306 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19891 | holiday-junction resolvase | |||
| 19896 | M | M.Ssp3CORF22825P (100% identity) | GATC | M.Sen1438ORF19896P |
| 19901 | 157 aa hypothetical protein | |||
| 9233 | global DNA-binding transcriptional dual | |||
| 9238 | M | methyltransferase | ATGCAT | M.Sen1438ORF9238P |
| 9243 | 54 aa hypothetical protein | |||
| 19961 | 245 aa hypothetical protein | |||
| ??? | M | M.SenHWS51ORF14380P (100% identity) | M.Sen1438ORF19966P | |
| 19971 | 249 aa hypothetical protein | |||
| 13077 | C4-type zinc finger protein, DksA/TraR family | |||
| 13082 | M | M.Ssp8103ORF5415P (100% identity) | GATC | M.Sen1438ORF13082P |
| 13087 | bacteriophage replication gene A protein | |||
| 3069 | 190 aa hypothetical protein | |||
| 3074 | M | M.Ssp3CORF17125P (100% identity) | M.Sen1438ORF3074P | |
| 3079 | 174 aa hypothetical protein | |||
| 8472 | hydrolase | |||
| 8477 | M | M.Ssp3CDcmP (100% identity) | CCWGG | M.Sen1438DcmP |
| 8482 | V | very short patch repair protein | V.Sen1438DcmP | |
| 8487 | DMT superfamily transporter inner | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3806 | major facilitator superfamily MFS_1 | |||
| 3811 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen1438ORF3811P |
| 3816 | R | Ssp3CORF13760P (99% identity) | CAGAG | Sen1438ORF3811P |
| 3821 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22456 | 44 aa hypothetical protein | |||
| ??? | R | SenSL913MrrP (100% identity) | Sen1438MrrP | |
| 22476 | Type I restriction-modification system | |||