Salmonella enterica subsp. enterica serovar Enteritidis 648900 1-16 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Enteritidis 648900 1-16 RM systems
Ref: Allard,M. et al. unpublished
REBASE ref # 15468
Contig set: 4,746,502 bp
GenBank #: ALHL00000000 (NZ_ALHL00000000)
REBASE acronym: Sen116
Org_num: 10038
All begin SEEE0116_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12639 | 306 aa hypothetical protein | |||
| 12644 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Sen116ORF12654P |
| 12649 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen116ORF12654P |
| 12654 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen116ORF12654P |
| ??? | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23172 | global DNA-binding transcriptional dual | |||
| 23177 | M | methyltransferase | ATGCAT | M.Sen116ORF23177P |
| 23182 | 54 aa hypothetical protein | |||
| 1562 | hydrolase | |||
| 1567 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen116DcmP |
| 1572 | V | very short patch repair protein | V.Sen116DcmP | |
| 1577 | DMT superfamily transporter inner | |||
| 8369 | 75 aa hypothetical protein | |||
| 8374 | M | M.SspA39ORFGP (100% identity) | GATC | M.Sen116ORF8374P |
| 8379 | replication endonuclease from prophage-like | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6328 | metabolite transport protein | |||
| 6333 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Sen116ORF6333P |
| ??? | R | SenSL913ORF3124P (100% identity) | CAGAG | Sen116ORF6333P |
| 6343 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12654 | Type I restriction-modification system | |||
| ??? | R | SenSL913MrrP (100% identity) | Sen116MrrP | |
| 12674 | 44 aa hypothetical protein | |||