Cecembia lonarensis LW9 |
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Putative Cecembia lonarensis LW9 RM systems
Ref: Shivaji,S. et al. J. Bacteriol. 194 (23), 6631 (2012)
REBASE ref # 15194
Contig set: 4,842,844 bp
GenBank #: AMGM00000000 (NZ_AMGM00000000)
REBASE acronym: CloLW9
Org_num: 9634
All begin B879_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2879 | S | S.Fax2ORF54630P (39% identity) | S.CloLW9ORF2881P | |
| 2880 | 377 aa hypothetical protein | |||
| 2881 | M | M.IalLW1ORF174P (92% identity) | M.CloLW9ORF2881P | |
| 2882 | transcription regulator containing HTH | |||
| 1075 | 52 aa hypothetical protein | |||
| 1076 | C | C.Ale2010ORFDP (80% identity) | C.CloLW9ORF1076P | |
| 1077 | Adenine specific DNA methylase Mod | |||
| 3561 | 5-methylcytosine-specific restriction enzyme B | |||
| 3562 | S | S4.Fsp3904ORFAP (35% identity) | S.CloLW9ORF3564P | |
| 3563 | Virulence protein | |||
| 3564 | M | M.CscJUb44ORF17815P (81% identity) | M.CloLW9ORF3564P | |
| 3565 | R | CspISE14ORF6310P (60% identity) | CloLW9ORF3564P | |
| 3566 | Transposase | |||
| 3552 | 385 aa hypothetical protein | |||
| 3553 | R | NhaLW7ORFBP (97% identity) | CloLW9ORF3553P | |
| 3554 | 185 aa hypothetical protein | |||
| 3264 | lactoylglutathione lyase-like protein | |||
| 3265 | R | Fsp83ORFFP (77% identity) | CloLW9ORF3270P | |
| 3266 | 280 aa hypothetical protein | |||
| 3267 | 272 aa hypothetical protein | |||
| 3268 | 193 aa hypothetical protein | |||
| 3269 | S | S.Fsp83ORFFP (45% identity) | S.CloLW9ORF3270P | |
| 3270 | M | M.Nar67ORF1995P (78% identity) | M.CloLW9ORF3270P | |
| 3271 | protein containing region found in RelA / SpoT | |||
| 1241 | GIY-YIG nuclease superfamily protein | |||
| 1242 | M | M.Bba15883ORF2142P (82% identity) | M.CloLW9ORF1242P | |
| 1243 | S | S.Aba17537ORF4447P (51% identity) | S.CloLW9ORF1242P | |
| 1244 | Piwi domain protein | |||
| 1247 | GxxExxY protein | |||
| 1248 | R | Bba15883ORF101P (98% identity) | CloLW9ORF1248P | |
| 1249 | 106 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | RM | Bba15883ORF2725P (27% identity) | CloLW9ORFAP | |
| ??? | RM | DNA methyltransferase yeeA | CloLW9ORFBP | |
| ??? | RM | Asp4N3ORF4970P (46% identity) | CloLW9ORF3346P | |
| 3348 | 300 aa hypothetical protein | |||
| 3186 | M | M.LbyORF413P (93% identity) | CTRYAG | M.CloLW9ORF3186P |
| 3187 | 188 aa hypothetical protein | |||
| 3191 | 312 aa hypothetical protein | |||
| 3192 | M | M.Fco02TNORF13525P (83% identity) | GRCGYC | M.CloLW9ORF3192P |
| 3193 | R | SspPCS056ORF17095P (75% identity) | GRCGYC | CloLW9ORF3192P |
| 3194 | Thiol-disulfide oxidoreductase resA | |||
| 3132 | Oxaloacetate decarboxylase | |||
| 3133 | R | DprORF1015P (47% identity) | CloLW9ORF3134P | |
| 3134 | M | M.Dma2077ORF70150P (53% identity) | M.CloLW9ORF3134P | |
| 568 | 214 aa hypothetical protein | |||
| 569 | M | M.Bba15883ORF870P (66% identity) | CCGG | M.CloLW9ORF569P |
| 570 | 132 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1076 | helix-turn-helix protein | |||
| 1077 | M | M.NhaLW7ORFAP (60% identity) | M.CloLW9ORF1077P | |
| 1078 | 357 aa hypothetical protein | |||
| 1079 | 70 aa hypothetical protein | |||
| 1080 | R | NhaLW7ORFAP (97% identity) | CloLW9ORF1077P | |
| 1081 | 555 aa hypothetical protein | |||
| 2861 | 88 aa hypothetical protein | |||
| 2862 | M | M.PmeBin120ORFAP (62% identity) | M.CloLW9ORF2862P | |
| 2863 | R | MspF43ORF32420P (67% identity) | CloLW9ORF2862P | |
| 2864 | 278 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3559 | 204 aa hypothetical protein | |||
| 3560 | R | Fbr35035McrCP (45% identity) | CloLW9McrCP | |
| 3561 | R | BspD4McrBP (30% identity) | CloLW9McrBP | |
| 3562 | Type I restriction modification DNA specificity | |||