Pseudomonas mendocina S5.2 |
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Putative Pseudomonas mendocina S5.2 RM systems
Ref: Chong,T.M. et al. J. Bacteriol. 194 (22), 6366 (2012)
REBASE ref # 14194
| Sequence length: | GenBank #: | |
| Chromosome: | 5,120,146 bp | CP013124 |
| plasmid unnamed: | 252,328 bp | CP013125 |
REBASE acronym: Pme5
Org_num: 9660
All begin DW68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22280 | NAD-dependent succinate-semialdehyde | |||
| 22290 | R | PmeS132IIP (100% identity) | CCCNNNNNNTGCG | Pme5IP |
| ??? | S | S.PmeS132II (100% identity) | CCCNNNNNNTGCG | S.Pme5I |
| 22300 | M | M2.PmeS132II (100% identity) | CCCNNNNNNTGCG | M2.Pme5I |
| 22305 | hydroxyacid dehydrogenase | |||
| 22310 | M | M1.PmeS132II (100% identity) | CCCNNNNNNTGCG | M1.Pme5I |
| 22315 | phosphohydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed | ||||
| 23885 | 186 aa hypothetical protein | |||
| ??? | M | M.PmeS132ORF25830P (100% identity) | M.Pme5ORF23895P | |
| 23900 | 69 aa hypothetical protein | |||
| 23950 | 87 aa hypothetical protein | |||
| 23955 | M | M.PmeS132ORF25770P (100% identity) | CCNGG | M.Pme5ORF23955P |
| 23960 | DNA-binding protein HU | |||
| 24465 | abortive infection family protein | |||
| 24470 | RM | PmeS132I (100% identity) | GACGAG | Pme5II |
| 24475 | 107 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed | ||||
| 24120 | 92 aa hypothetical protein | |||
| 24125 | R | PmeS132MrrP (100% identity) | Pme5MrrP | |
| 24130 | 87 aa hypothetical protein | |||