Burkholderia pseudomallei BPC006 |
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Putative Burkholderia pseudomallei BPC006 RM systems
Ref: Fang,Y. et al. unpublished
REBASE ref # 14926
| Sequence length: | GenBank #: | |
| chromosome I: | 4,001,777 bp | CP003781 |
| chromosome II: | 3,153,284 bp | CP003782 |
REBASE acronym: Bps6
Org_num: 9336
All begin BPC006_I, BPC006_II
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 3925 | amino acid permease | |||
| 3926 | M | M.BpsBEJORFEP (100% identity) | M.Bps6ORF3926P | |
| 3927 | 352 aa hypothetical protein | |||
| ??? | S | S.Bps901ORF13955P (100% identity) | S.Bps6ORF3926P | |
| 3928 | R | BpsBEJORFEP (100% identity) | Bps6ORF3926P | |
| 3929 | 86 aa hypothetical protein | |||
| chromosome II | ||||
| 573 | 41 aa hypothetical protein | |||
| 574 | R | BpsSW9ORF5553P (94% identity) | Bps6ORF575P | |
| 575 | M | M.BpsSW9ORF5553P (100% identity) | M.Bps6ORF575P | |
| ??? | S | S.BpsSW9ORF5553P (44% identity) | S.Bps6ORF575P | |
| 576 | transposase, IS4 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1170 | 173 aa hypothetical protein | |||
| 1171 | M | M.Bps708ORF5450P (100% identity) | M.Bps6ORF1171P | |
| 1172 | 50 aa hypothetical protein | |||
| 1172 | 50 aa hypothetical protein | |||
| 1173 | M | DNA adenine methylase | M.Bps6ORF1173P | |
| 1174 | 88 aa hypothetical protein | |||
| 2431 | 158 aa hypothetical protein | |||
| 2432 | M | 56 aa hypothetical protein | M.Bps6ORF2432P | |
| 2433 | 42 aa hypothetical protein | |||
| 3732 | 541 aa hypothetical protein | |||
| 3734 | RM | BpsR15ORFBP (100% identity) | Bps6ORF3734P | |
| ??? | V | V.BpsR15ORFCP (100% identity) | V.Bps6ORF3734P | |
| ??? | M | M.BpsR15ORFCP (100% identity) | M.Bps6ORF3734P | |
| 3736 | prophage CP4-57 regulatory protein (AlpA) | |||
| chromosome II | ||||
| 541 | 62 aa hypothetical protein | |||
| 542 | M | M.BpsEY1ORF765P (86% identity) | M.Bps6ORF542P | |
| 543 | 154 aa hypothetical protein | |||
| 2279 | tryptophan synthase subunit alpha | |||
| 2280 | M | M.BspBGKORF4324P (100% identity) | GTWWAC | M.Bps6ORF2280P |
| 2281 | tryptophan synthase subunit beta | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 46 | 60 aa hypothetical protein | |||
| 47 | M | M.BspBGKORF17P (100% identity) | CACAG | M.Bps6ORF47P |
| 48 | R | BspBGKORF17P (100% identity) | CACAG | Bps6ORF47P |
| 49 | 34 aa hypothetical protein | |||