Escherichia coli DEC13D |
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Putative Escherichia coli DEC13D RM systems
Ref: Hazen,T.H. et al. J. Bacteriol. 194 (11), 3026-3027 (2012)
REBASE ref # 14514
GenBank #: AIHI00000000
REBASE acronym: EcoDEC13D
Org_num: 9088
All begin ECDEC13D_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4793 | transposase family protein | |||
| 4794 | R | Ecoi68ORF3737P (100% identity) | EcoDEC13DORF4795P | |
| 4795 | M | M.Ecoi68ORF3737P (100% identity) | M.EcoDEC13DORF4795P | |
| ??? | S | S.Ecoi68ORF3737P (98% identity) | S.EcoDEC13DORF4795P | |
| 4796 | 529 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1504 | 65 aa hypothetical protein | |||
| 1505 | M | M.EcoDEC13EORF814P (100% identity) | A | M.EcoDEC13DORF1505P |
| 1508 | membrane protein | |||
| 1486 | membrane protein | |||
| 1487 | M | M.EcoDEC13EORF792P (100% identity) | M.EcoDEC13DORF1487P | |
| 1488 | 60 aa hypothetical protein | |||
| 1707 | 401 aa hypothetical protein | |||
| 1708 | M | M.EcoVL02ORF18020P (99% identity) | M.EcoDEC13DORF1708P | |
| 1709 | 38 aa hypothetical protein | |||
| 2263 | carboxylate/Amino Acid/Amine Transporter family | |||
| 2264 | V | V.SflFF59DcmP (100% identity) | V.EcoDEC13DDcmP | |
| 2265 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoDEC13DDcmP |
| 2266 | HD domain protein | |||
| 3402 | 115 aa hypothetical protein | |||
| 3403 | M | M.Kpn80191ORFAP (100% identity) | CTGAAG | M.EcoDEC13DORF3403P |
| 3404 | 109 aa hypothetical protein | |||
| 3728 | fis transcriptional dual regulator | |||
| 3729 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.EcoDEC13DORF3729P |
| 3730 | 37 aa hypothetical protein | |||
| 3784 | reverse transcriptase family protein | |||
| 3785 | M | M.EcoM3ORF25500P (95% identity) | M.EcoDEC13DORF3785P | |
| 3786 | 73 aa hypothetical protein | |||
| 3840 | ribulose-phosphate 3-epimerase | |||
| 3841 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDEC13DDamP |
| 3842 | cell division protein DamX | |||
| 4453 | bacteriophage replication protein | |||
| 4454 | M | M.EcoDEC13CORF4731P (100% identity) | GGCC | M.EcoDEC13DORF4454P |
| 4455 | 329 aa hypothetical protein | |||
| 4952 | pglZ domain protein | |||
| ??? | RM | EcoDEC13CORF5243P (100% identity) | EcoDEC13DORF4953P | |
| 4955 | DNA repair ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5037 | phage integrase | |||
| 5038 | M | M.EcoS6685ORFCP (96% identity) | M.EcoDEC13DORF5038P | |
| 5039 | R | EcoDEC13EORF4778P (100% identity) | EcoDEC13DORF5038P | |
| 5040 | 269 aa hypothetical protein | |||