Escherichia coli DEC12C |
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Putative Escherichia coli DEC12C RM systems
Ref: Hazen,T.H. et al. J. Bacteriol. 194 (11), 3026-3027 (2012)
REBASE ref # 14514
GenBank #: AIHC00000000
REBASE acronym: EcoDEC12C
Org_num: 9082
All begin ECDEC12C_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5322 | 58 aa hypothetical protein | |||
| 5323 | R | EcoS7380ORFEP (100% identity) | EcoDEC12CORF5328P | |
| ??? | S | S.EcoDEC12EORF14P (100% identity) | S.EcoDEC12CORF5328P | |
| 5328 | M | M.SflN110ORF19045P (100% identity) | M.EcoDEC12CORF5328P | |
| 5329 | restriction methylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5334 | integrase core domain protein | |||
| 5335 | R | SflSTLE4ORF19250P (81% identity) | EcoDEC12CORF5335P | |
| 5336 | 326 aa hypothetical protein | |||
| 5578 | M | modification methylase DpnIIB domain protein | M.EcoDEC12CORF5578P | |
| 5581 | 160 aa hypothetical protein | |||
| 5820 | 83 aa hypothetical protein | |||
| 5821 | M | M.EcoS7380ORFJP (100% identity) | GATC | M.EcoDEC12CORF5821P |
| 5822 | crossover junction endodeoxyribonuclease rusA | |||
| 641 | 83 aa hypothetical protein | |||
| 642 | M | M.EcoSO40ORF27175P (100% identity) | GATC | M.EcoDEC12CORF642P |
| 643 | lexA DNA binding domain protein | |||
| 937 | protein ninB | |||
| 938 | M | M.EcoS7380ORFIP (94% identity) | GATC | M.EcoDEC12CORF938P |
| 939 | integrase core domain protein | |||
| 1204 | 94 aa hypothetical protein | |||
| 1205 | M | DNA methylase family protein | M.EcoDEC12CORF1205P | |
| 1845 | 620 aa hypothetical protein | |||
| 1849 | M | M.EcoDEC12EORF951P (99% identity) | M.EcoDEC12CORF1849P | |
| 1850 | 94 aa hypothetical protein | |||
| 2277 | tciA | |||
| ??? | M | M.EcosB7AORFAP (99% identity) | M.EcoDEC12CORF2281P | |
| 2283 | 65 aa hypothetical protein | |||
| 2412 | 306 aa hypothetical protein | |||
| 2413 | V | V.SflFF59DcmP (100% identity) | V.EcoDEC12CDcmP | |
| 2414 | M | M.EcoS7380DcmP (99% identity) | CCWGG | M.EcoDEC12CDcmP |
| 2415 | 231 aa hypothetical protein | |||
| 2663 | 59 aa hypothetical protein | |||
| 2664 | M | M.EcoSO40ORF23900P (94% identity) | GATC | M.EcoDEC12CORF2664P |
| 2665 | 129 aa hypothetical protein | |||
| 3136 | 179 aa hypothetical protein | |||
| 3137 | R | EcoDEC10EORF2991P (100% identity) | CCTNAGG | EcoDEC12CORF3138P |
| 3138 | M | M.EcoDEC10EORF2991P (100% identity) | CCTNAGG | M.EcoDEC12CORF3138P |
| 3139 | 74 aa hypothetical protein | |||
| 3318 | ribosome-associated inhibitor A | |||
| 3319 | M | M.SenYU39ORF1896P (100% identity) | M.EcoDEC12CORF3319P | |
| 3320 | TM2 domain protein | |||
| 4135 | DNA-binding protein fis | |||
| 4136 | M | M.EcoS7380ORFAP (99% identity) | ATGCAT | M.EcoDEC12CORF4136P |
| 4137 | 37 aa hypothetical protein | |||
| 4270 | ribulose-phosphate 3-epimerase | |||
| 4271 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDEC12CDamP |
| 4272 | protein damX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5329 | restriction methylase | |||
| 5330 | R | SflSTLE4McrBP (100% identity) | EcoDEC12CMcrBP | |
| 5331 | R | SflSTLE4McrCP (100% identity) | EcoDEC12CMcrCP | |
| 5332 | restriction endonuclease | |||