Escherichia coli DEC6D |
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Putative Escherichia coli DEC6D RM systems
Ref: Hazen,T.H. et al. J. Bacteriol. 194 (11), 3026-3027 (2012)
REBASE ref # 14514
GenBank #: AIFY00000000
REBASE acronym: EcoDEC6D
Org_num: 9051
All begin ECDEC6D_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5147 | toxic protein symE | |||
| 5148 | S | S.Ecos15955ORF12100P (67% identity) | S.EcoDEC6DORF5149P | |
| 5149 | M | M.EcoDEC6EORF4998P (100% identity) | M.EcoDEC6DORF5149P | |
| 5150 | R | Ecos15955ORF12100P (99% identity) | EcoDEC6DORF5149P | |
| 5151 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1471 | 65 aa hypothetical protein | |||
| 1472 | M | M.EcoDEC6EORF1313P (100% identity) | A | M.EcoDEC6DORF1472P |
| 1475 | 458 aa hypothetical protein | |||
| 2339 | 306 aa hypothetical protein | |||
| ??? | V | V.SsoSE61DcmP (100% identity) | V.EcoDEC6DDcmP | |
| 2341 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.EcoDEC6DDcmP |
| 2342 | 231 aa hypothetical protein | |||
| 2223 | lexA DNA binding domain protein | |||
| 2224 | M | M.SflFF35ORF16050P (100% identity) | GATC | M.EcoDEC6DORF2224P |
| 2225 | 37 aa hypothetical protein | |||
| 3917 | DNA-binding protein fis | |||
| 3918 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoDEC6DORF3918P |
| 3919 | 37 aa hypothetical protein | |||
| 4035 | ribulose-phosphate 3-epimerase | |||
| 4036 | M | DNA adenine methylase | GATC | M.EcoDEC6DDamP |
| 4037 | protein damX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5150 | type III restriction enzyme, res subunit | |||
| 5151 | R | Ssp28760MrrP (100% identity) | EcoDEC6DMrrP | |
| 5152 | 318 aa hypothetical protein | |||