Escherichia coli DEC6C |
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Putative Escherichia coli DEC6C RM systems
Ref: Hazen,T.H. et al. J. Bacteriol. 194 (11), 3026-3027 (2012)
REBASE ref # 14514
GenBank #: AIFX00000000
REBASE acronym: EcoDEC6C
Org_num: 9047
All begin ECDEC6C_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5170 | toxic protein symE | |||
| ??? | S | S.Ecos15955ORF12100P (75% identity) | S.EcoDEC6CORF5173P | |
| 5173 | M | M.Ecos15955ORF12100P (100% identity) | M.EcoDEC6CORF5173P | |
| 5174 | R | Ecos15955ORF12100P (99% identity) | EcoDEC6CORF5173P | |
| 5175 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5330 | 88 aa hypothetical protein | |||
| ??? | M | hypothetical protein | M.EcoDEC6CORF5331P | |
| 5333 | 45 aa hypothetical protein | |||
| 596 | 43 aa hypothetical protein | |||
| 597 | M | M.EcoSO173ORF23940P (100% identity) | M.EcoDEC6CORF597P | |
| 598 | 66 aa hypothetical protein | |||
| 2110 | 41 aa hypothetical protein | |||
| 2111 | M | M.Eco3133ORF26830P (99% identity) | M.EcoDEC6CORF2111P | |
| 2112 | 73 aa hypothetical protein | |||
| 2224 | 268 aa hypothetical protein | |||
| 2225 | M | DNA methylase family protein | M.EcoDEC6CORF2225P | |
| 2226 | 65 aa hypothetical protein | |||
| 2123 | 818 aa hypothetical protein | |||
| 2124 | M | M.Eco65CSORFCP (100% identity) | M.EcoDEC6CORF2124P | |
| 2125 | 166 aa hypothetical protein | |||
| 2360 | very short patch repair protein | |||
| 2361 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoDEC6CORF2361P |
| 2362 | 231 aa hypothetical protein | |||
| 2359 | 306 aa hypothetical protein | |||
| 2360 | V | V.SsoSE61DcmP (100% identity) | V.EcoDEC6CDcmP | |
| 2361 | DNA-cytosine methyltransferase | |||
| 3919 | DNA-binding protein fis | |||
| 3920 | M | M.SflLIN12ORF2260P (100% identity) | ATGCAT | M.EcoDEC6CORF3920P |
| 3921 | 37 aa hypothetical protein | |||
| 4055 | ribulose-phosphate 3-epimerase | |||
| 4056 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDEC6CDamP |
| 4057 | protein damX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | type I restriction-modification subunit | |||
| 5405 | R | 5-methylcytosine specificity modulation | EcoDEC6CMcrCP | |
| 5091 | R | Eco9272McrBP (51% identity) | EcoDEC6CMcrB2P | |
| 5174 | type III restriction enzyme, res subunit | |||
| 5175 | R | Ssp28760MrrP (100% identity) | EcoDEC6CMrrP | |
| 5176 | 318 aa hypothetical protein | |||