Escherichia coli DEC5D |
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Putative Escherichia coli DEC5D RM systems
Ref: Hazen,T.H. et al. J. Bacteriol. 194 (11), 3026-3027 (2012)
REBASE ref # 14514
GenBank #: AIFT00000000
REBASE acronym: EcoDEC5D
Org_num: 9043
All begin ECDEC5D_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 227 | 113 aa hypothetical protein | |||
| 228 | S | S.EcoTB182AORF22480P (100% identity) | CACNNNNNNNCTGG | S.EcoDEC5DORF229P |
| 229 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoDEC5DORF229P |
| 230 | R | EcoTB182AORF22480P (100% identity) | CACNNNNNNNCTGG | EcoDEC5DORF229P |
| 231 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 176 | helicase conserved C-terminal domain protein | |||
| 177 | RM | EcoTB182AORF22705P (100% identity) | GAAABCC | EcoDEC5DORF177P |
| 160 | 204 aa hypothetical protein | |||
| 161 | M | M.EcoTB182AORF22780P (100% identity) | M.EcoDEC5DORF161P | |
| 162 | 370 aa hypothetical protein | |||
| 594 | M | M.EcoTB182AORF20675P (100% identity) | GATC | M.EcoDEC5DORF594P |
| 595 | ninF family protein | |||
| 947 | 71 aa hypothetical protein | |||
| 948 | M | M.EcoTB182AORF18900P (100% identity) | GATC | M.EcoDEC5DORF948P |
| 949 | 53 aa hypothetical protein | |||
| 2649 | carboxylate/Amino Acid/Amine Transporter family | |||
| 2650 | V | V.EcosPA8DcmP (100% identity) | V.EcoDEC5DDcmP | |
| 2651 | M | M.EcoTB182ADcmP (100% identity) | CCWGG | M.EcoDEC5DDcmP |
| 2652 | HD domain protein | |||
| 4146 | fis transcriptional dual regulator | |||
| ??? | M | M.EcoDEC5CORF4025P (100% identity) | ATGCAT | M.EcoDEC5DORFAP |
| 4148 | 37 aa hypothetical protein | |||
| 4250 | ribulose-phosphate 3-epimerase | |||
| 4251 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDEC5DDamP |
| 4252 | cell division protein DamX | |||
| 5221 | 83 aa hypothetical protein | |||
| 5222 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoDEC5DORF5222P |
| 5223 | lexA DNA binding domain protein | |||
| 5310 | yceA protein | |||
| ??? | M | M.EcoTB182AORF25840P (100% identity) | M.EcoDEC5DORFBP | |
| 5312 | 41 aa hypothetical protein | |||