Escherichia coli DEC4E |
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Putative Escherichia coli DEC4E RM systems
Ref: Hazen,T.H. et al. J. Bacteriol. 194 (11), 3026-3027 (2012)
REBASE ref # 14514
GenBank #: AIFO00000000
REBASE acronym: EcoDEC4E
Org_num: 9038
All begin ECDEC4E_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5335 | type I restriction-modification system, | |||
| 5336 | S | S.Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | S.EcoDEC4EORF5337P |
| 5337 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoDEC4EORF5337P |
| 5338 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoDEC4EORF5337P |
| 5339 | 87 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1168 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.EcoDEC4EORFAP | |
| 1171 | 109 aa hypothetical protein | |||
| 1342 | 41 aa hypothetical protein | |||
| 1343 | M | M.EcosPA8ORF27775P (99% identity) | M.EcoDEC4EORF1343P | |
| 1344 | 73 aa hypothetical protein | |||
| 1809 | 65 aa hypothetical protein | |||
| 1810 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoDEC4EORF1810P | |
| 1813 | 9-O-acetyl-N-acetylneuraminate esterase | |||
| 2616 | carboxylate/Amino Acid/Amine Transporter family | |||
| 2617 | V | V.EcosPA8DcmP (100% identity) | V.EcoDEC4EDcmP | |
| 2618 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoDEC4EDcmP |
| 2619 | HD domain protein | |||
| 4217 | fis transcriptional dual regulator | |||
| 4218 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoDEC4EORF4218P |
| 4219 | 37 aa hypothetical protein | |||
| 4323 | ribulose-phosphate 3-epimerase | |||
| 4324 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDEC4EDamP |
| 4325 | cell division protein DamX | |||
| 5286 | helicase conserved C-terminal domain protein | |||
| 5287 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoDEC4EORF5287P |